| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
Click here to switch to the map view.
The map label for this gene is coaBC [H]
Identifier: 153931189
GI number: 153931189
Start: 2521123
End: 2522310
Strand: Reverse
Name: coaBC [H]
Synonym: CLB_2385
Alternate gene names: 153931189
Gene position: 2522310-2521123 (Counterclockwise)
Preceding gene: 153933120
Following gene: 153933517
Centisome position: 65.29
GC content: 29.97
Gene sequence:
>1188_bases ATGAATAAAAAATGTGTAGTATTAGGTGTAACAGGAGGAATAGCTAGCTATAAAGCTCTAGATATAGTGAGCAAACTAAA AAAGCTTAATTATGATGTAAATGTAATAATGACAAAGTCTGCACTACAGTTTATACATCCACTACCTTTTCAAAGTTTAA GTGGTAATATGGTTTCAAAGGATATGTTTGAAGAACCAAAAGCCTTTGAAATACAACATATATCCTTAGCTAAAAAGGCA GATATGATATTGGTAGCTCCTGCTACAGCTAATATTATTGGAAAAGTAGCTAATGGTATAGCTGATGATATGTTATCTAC TACTATAATGGCAGCTACTTGTCCTGTAGTATTTGTACCAGCTATGAATACAAACATGTATAAAAATCCTATAGTAAAAA ATAATATAGAAAAACTAAAAGGCTTTGGTTATGAATTTATTAACCCTATATCTGGAAGACTAGCCTGTGGAGATGTAGGG GAAGGTAAAATGGCTGATACTGAAGATATAGTAGAAATAGCAGATAGTATGCTTTATCCTATAAAAGACTTAATAGGGAA AAATATACTAGTTACTGCAGGGCCTACCCTAGCACCTATAGATCCAGTAAGATACATAACAAATAAATCTTCTGGAAAAA TGGGATATTCTATAGCAAAGGAAGCTAGAGATAGAGGTGCAAAGGTTACATTAGTATCTGGCCCTACAAACTTAAAAACA CCTTTAGGCTTGGATATAATAAAAGTTAATACAAATGAAGAGATGCTTAAAGCTGTTAAAGATAATTTTGAAAGGCAGCA TATAGTTATAAAATCTGCAGCTGTGGCAGATTACAAACCTAAAGAATATAAAGAGCATAAAATAAAAAAAACCGGTGATA ATTTCAATTTAGAGCTAATAAAAGATAAAGATATTTTAAAAGAATTAGGACTAATAAAAAAGAATCAAATATTGGTAGGC TTTGCAGCAGAAAGTAAAGATCTTTTAGATAATGCTAAATCTAAATTAGAGAAAAAAAACTTAGATTTTATAGTAGCAAA TAATATCCTGTCAAAGGAAACAGGATTTGCATCAGAGGACAATTTGGTTACAATAGTATCTAAAGATGGATGTATTAAAA ATTTAGAAAAGATGTCTAAAAGAGAAGTGGCTAAAGAGATATTTGATACTATATTAAATAAAAAATAA
Upstream 100 bases:
>100_bases CTTGTAGATATAGATTCAACTAAACCTGTTACAGTAGCAATAAATGAAATACATGAAGGAAAAATAACCTATAAAACAGT TAAAGAAGGAATAAAATAAA
Downstream 100 bases:
>100_bases TATGAAAATAAAAGAGAGGCAATAACCTTATAAGTTAAGCCTCTTTTATTTAGCGGATAAACAGGTGCCTAGGCAATAAT ATAGAGTTTTAGCTCTATGT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSKDMFEEPKAFEIQHISLAKKA DMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVPAMNTNMYKNPIVKNNIEKLKGFGYEFINPISGRLACGDVG EGKMADTEDIVEIADSMLYPIKDLIGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKT PLGLDIIKVNTNEEMLKAVKDNFERQHIVIKSAAVADYKPKEYKEHKIKKTGDNFNLELIKDKDILKELGLIKKNQILVG FAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASEDNLVTIVSKDGCIKNLEKMSKREVAKEIFDTILNKK
Sequences:
>Translated_395_residues MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSKDMFEEPKAFEIQHISLAKKA DMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVPAMNTNMYKNPIVKNNIEKLKGFGYEFINPISGRLACGDVG EGKMADTEDIVEIADSMLYPIKDLIGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKT PLGLDIIKVNTNEEMLKAVKDNFERQHIVIKSAAVADYKPKEYKEHKIKKTGDNFNLELIKDKDILKELGLIKKNQILVG FAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASEDNLVTIVSKDGCIKNLEKMSKREVAKEIFDTILNKK >Mature_395_residues MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSKDMFEEPKAFEIQHISLAKKA DMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVPAMNTNMYKNPIVKNNIEKLKGFGYEFINPISGRLACGDVG EGKMADTEDIVEIADSMLYPIKDLIGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKT PLGLDIIKVNTNEEMLKAVKDNFERQHIVIKSAAVADYKPKEYKEHKIKKTGDNFNLELIKDKDILKELGLIKKNQILVG FAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASEDNLVTIVSKDGCIKNLEKMSKREVAKEIFDTILNKK
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=180, Percent_Identity=37.7777777777778, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI87082301, Length=371, Percent_Identity=43.1266846361186, Blast_Score=291, Evalue=7e-80, Organism=Caenorhabditis elegans, GI17560194, Length=186, Percent_Identity=34.9462365591398, Blast_Score=99, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6322762, Length=199, Percent_Identity=32.1608040201005, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24657262, Length=189, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43369; Mature: 43369
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSK CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCH DMFEEPKAFEIQHISLAKKADMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVP HHHCCCCCEEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AMNTNMYKNPIVKNNIEKLKGFGYEFINPISGRLACGDVGEGKMADTEDIVEIADSMLYP CCCCCCCCCCCHHCCHHHHHCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH IKDLIGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKT HHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCC PLGLDIIKVNTNEEMLKAVKDNFERQHIVIKSAAVADYKPKEYKEHKIKKTGDNFNLELI CCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECHHCCCCCHHHHHHHHHCCCCCCEEEEE KDKDILKELGLIKKNQILVGFAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASED CCHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCC NLVTIVSKDGCIKNLEKMSKREVAKEIFDTILNKK CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSK CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCH DMFEEPKAFEIQHISLAKKADMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVP HHHCCCCCEEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AMNTNMYKNPIVKNNIEKLKGFGYEFINPISGRLACGDVGEGKMADTEDIVEIADSMLYP CCCCCCCCCCCHHCCHHHHHCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH IKDLIGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKT HHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCC PLGLDIIKVNTNEEMLKAVKDNFERQHIVIKSAAVADYKPKEYKEHKIKKTGDNFNLELI CCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECHHCCCCCHHHHHHHHHCCCCCCEEEEE KDKDILKELGLIKKNQILVGFAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASED CCHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCC NLVTIVSKDGCIKNLEKMSKREVAKEIFDTILNKK CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]