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The map label for this gene is gerKB [H]

Identifier: 152977331

GI number: 152977331

Start: 3713484

End: 3714581

Strand: Reverse

Name: gerKB [H]

Synonym: Bcer98_3656

Alternate gene names: 152977331

Gene position: 3714581-3713484 (Counterclockwise)

Preceding gene: 152977332

Following gene: 152977330

Centisome position: 90.89

GC content: 38.34

Gene sequence:

>1098_bases
ATGGTTGAAAAAGGGAAAATTTCTGCGTTTCAGATGGCGCTTATCATCATACCAACAATCATTGCAACGGCTGTTCTTAT
TGTTCCAGCCATTACAAGTGAGCACGCAGAGCGCGATATATGGATTTCACCAATTTGGGCGTCTCTCAATGGTTTTTTTA
CTGTATTTGTCGTATATCAATTGCATAAGTGTTATCCAGAGAAATCGATTATACAATATAGTAAATATATCGTCGGCCGG
ATTCCAGGAAAAATCCTTGGGCTTGTCTATCTGTTCTTCATTTTACATATATGCGGCATAATAACTAGGGAGTACGCAGA
TTTCGTCATTGGTTCTTTTTTACCTAAGACTCCGATTATTGTAGTGATTGGAAGCATGATTCTAATTTGTGGGTTTGCGG
TTCGAGGTGGTATAGAAGTATTAGGAAGGGCATCGCAACTGTTCGTTCCGCTATTTTTATTTCCACCTGTCCTCTTTTTC
CTGCTTATACCTGACTTGAAAATAGAGAATATGTTTCCAATTATGGAGCATGGTGTGCTGCCTTCAATCCTTGGTTCAAC
TGTGCCACAGGCTTGGTTTAGTGAAGTGTCTCTTATCTCTATGCTACTTCCTTTTGTAACAGATTGTGAAAAAGGGAGAA
AGTGGGGGATAATCTCGGTGTTTGTCGCAATGTTCATTCTGCTTTATGCTAATATAATTGGAGTTTTGCTGTTTGGAGGA
ACAGTAATTAGTCATATATATCCAGTGTTTACTGCTTTTCGATACATTAGTGTTGCTACTTTTTTTGAACATCTTGAGTC
AATTGTGATTACTCTTTGGGTGTTGGGGGCGTTCATCAAAATTTCCGTATTTTATTATGTACTTGTTCTAGGGACTGCGC
AATGGCTTCATCTGTCTGACTACCGTCCCATTGTGTTTCCACTTGGTTTTTTTGTAATACTAATTGGTGTATGGGCATTT
TCTAGTGGACAGGAAATGACTCGATTTTTAGGAAACATCTCTCCTTTTTATATACCGTGTATGATGACGCTTATGCCGAC
AGTGCTGTTACTTATCACTTTTATTAGAAAAAAGAGGTCTTACACAGTGAAAGAATAA

Upstream 100 bases:

>100_bases
TTTTTCCGGACATGTTAGGGCCTACGCAAATGATTGAGAAGCTTTTCAAACCGCTTGGTAAAATGCTTGAGAAAAAGTAG
GATAAAAAGGAGACAAGAAA

Downstream 100 bases:

>100_bases
TATCGTATGTTCCTTAGACAAAGGAGAAAAAGACATGATGCGGGAAAAAATAGGAATTATGCAACTTTTTTATATTATGA
TGGCTTTCGAAGTGGGGAGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVEKGKISAFQMALIIIPTIIATAVLIVPAITSEHAERDIWISPIWASLNGFFTVFVVYQLHKCYPEKSIIQYSKYIVGR
IPGKILGLVYLFFILHICGIITREYADFVIGSFLPKTPIIVVIGSMILICGFAVRGGIEVLGRASQLFVPLFLFPPVLFF
LLIPDLKIENMFPIMEHGVLPSILGSTVPQAWFSEVSLISMLLPFVTDCEKGRKWGIISVFVAMFILLYANIIGVLLFGG
TVISHIYPVFTAFRYISVATFFEHLESIVITLWVLGAFIKISVFYYVLVLGTAQWLHLSDYRPIVFPLGFFVILIGVWAF
SSGQEMTRFLGNISPFYIPCMMTLMPTVLLLITFIRKKRSYTVKE

Sequences:

>Translated_365_residues
MVEKGKISAFQMALIIIPTIIATAVLIVPAITSEHAERDIWISPIWASLNGFFTVFVVYQLHKCYPEKSIIQYSKYIVGR
IPGKILGLVYLFFILHICGIITREYADFVIGSFLPKTPIIVVIGSMILICGFAVRGGIEVLGRASQLFVPLFLFPPVLFF
LLIPDLKIENMFPIMEHGVLPSILGSTVPQAWFSEVSLISMLLPFVTDCEKGRKWGIISVFVAMFILLYANIIGVLLFGG
TVISHIYPVFTAFRYISVATFFEHLESIVITLWVLGAFIKISVFYYVLVLGTAQWLHLSDYRPIVFPLGFFVILIGVWAF
SSGQEMTRFLGNISPFYIPCMMTLMPTVLLLITFIRKKRSYTVKE
>Mature_365_residues
MVEKGKISAFQMALIIIPTIIATAVLIVPAITSEHAERDIWISPIWASLNGFFTVFVVYQLHKCYPEKSIIQYSKYIVGR
IPGKILGLVYLFFILHICGIITREYADFVIGSFLPKTPIIVVIGSMILICGFAVRGGIEVLGRASQLFVPLFLFPPVLFF
LLIPDLKIENMFPIMEHGVLPSILGSTVPQAWFSEVSLISMLLPFVTDCEKGRKWGIISVFVAMFILLYANIIGVLLFGG
TVISHIYPVFTAFRYISVATFFEHLESIVITLWVLGAFIKISVFYYVLVLGTAQWLHLSDYRPIVFPLGFFVILIGVWAF
SSGQEMTRFLGNISPFYIPCMMTLMPTVLLLITFIRKKRSYTVKE

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41166; Mature: 41166

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKGKISAFQMALIIIPTIIATAVLIVPAITSEHAERDIWISPIWASLNGFFTVFVVYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
LHKCYPEKSIIQYSKYIVGRIPGKILGLVYLFFILHICGIITREYADFVIGSFLPKTPII
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VVIGSMILICGFAVRGGIEVLGRASQLFVPLFLFPPVLFFLLIPDLKIENMFPIMEHGVL
HHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHCCH
PSILGSTVPQAWFSEVSLISMLLPFVTDCEKGRKWGIISVFVAMFILLYANIIGVLLFGG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVISHIYPVFTAFRYISVATFFEHLESIVITLWVLGAFIKISVFYYVLVLGTAQWLHLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
YRPIVFPLGFFVILIGVWAFSSGQEMTRFLGNISPFYIPCMMTLMPTVLLLITFIRKKRS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
YTVKE
CCCCC
>Mature Secondary Structure
MVEKGKISAFQMALIIIPTIIATAVLIVPAITSEHAERDIWISPIWASLNGFFTVFVVYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
LHKCYPEKSIIQYSKYIVGRIPGKILGLVYLFFILHICGIITREYADFVIGSFLPKTPII
HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VVIGSMILICGFAVRGGIEVLGRASQLFVPLFLFPPVLFFLLIPDLKIENMFPIMEHGVL
HHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHCCH
PSILGSTVPQAWFSEVSLISMLLPFVTDCEKGRKWGIISVFVAMFILLYANIIGVLLFGG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVISHIYPVFTAFRYISVATFFEHLESIVITLWVLGAFIKISVFYYVLVLGTAQWLHLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
YRPIVFPLGFFVILIGVWAFSSGQEMTRFLGNISPFYIPCMMTLMPTVLLLITFIRKKRS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
YTVKE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]