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The map label for this gene is gerKB [H]

Identifier: 152977330

GI number: 152977330

Start: 3712355

End: 3713449

Strand: Reverse

Name: gerKB [H]

Synonym: Bcer98_3655

Alternate gene names: 152977330

Gene position: 3713449-3712355 (Counterclockwise)

Preceding gene: 152977331

Following gene: 152977329

Centisome position: 90.86

GC content: 37.17

Gene sequence:

>1095_bases
ATGATGCGGGAAAAAATAGGAATTATGCAACTTTTTTATATTATGATGGCTTTCGAAGTGGGGAGTACAGTAATTTATGG
ATTAGGGGTAGACGCGAAACAAGATGCCTGGTTAGTCATTCTAGTCGGTATGTTCTGTGGTTTCGTTTTAATGTGGATAT
ATACAAAATTATTTGAGTATTACTCGGGAGATACACTTACACAAATGATTCCTAAAATTGTGGGCAAACTTATCGGTTAC
CCTTTGAATGTAATCTACATTTTTTATTTTATTTATATAGCCGCACGAGTATTGAGAGATTTTGGTGAACTTATAACGGG
AACTTTTCTGCCGAAAACTCCTCTTATTATCGTTATCGGTAGTTTTATGCTTGTCATTGTGTATTGTTTACATGGTGGAA
TTGAAGTATTCGGACGTATGGGGGAGATATTCTTTCCTTTTTTGTTCCTTGTTGCGATATTAACATGGGCTATTGTATAC
AGCTCTCAAGTTGTTGATATAGAACAGCTCGCACCTGTACTAGAAAAAGGGTTCGGGCCAGTATGGGAGGCAGCCTTTCC
TCTTGTCATCACATTTCCATTCGGTGAAATGGTATTGTTTATGATGTTTTGGCCGGCATTACATGATTCGAGAAAGGTGA
AGAAATTAGGGATGGTAGTGGTTCTTGTAGCGGGAATTCTATTAACTGTAAATACAATCAGTATTCTTTCCGTCATAGGC
CCCAATTTAGTTAAGATGAAAACATATCCACTGCTTACAATCGTGAGGATGGCATCTATTGGAAATCTGATTGAACGAAT
TGATGCAGCTATCATTATAACGATGATGATCGGCGGATTTTTTAAGGTGGGATCGTTTCTATATGGTGCCGCAGTAGGAA
CTGCCCAATTGTTTAGATTGAAAAGCTATCGTTCTATAGTTGTTGTGTTTGGTGCAGTAGTAGTTCTGTTATCAATTATG
ATTGCGACTAATTACATGGAGCATGAAGAAATTGGAATAAAGAAGGTCCCGATCTTTCTACATATTCCACTCCAAATTGT
AATACCAGTTATTTTATTAGTTATCGCTATGATTCGGAAAAGGATACAGTCGTAA

Upstream 100 bases:

>100_bases
ATGCCGACAGTGCTGTTACTTATCACTTTTATTAGAAAAAAGAGGTCTTACACAGTGAAAGAATAATATCGTATGTTCCT
TAGACAAAGGAGAAAAAGAC

Downstream 100 bases:

>100_bases
GTTTCGGTATCAGGAAATAATTGAGTTGGCTATTTCATTTATAATGGGGAAAATGAGAGCTGATAGTATAAATGAAAAGG
CGAGAAATACAGCTTCAACT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MMREKIGIMQLFYIMMAFEVGSTVIYGLGVDAKQDAWLVILVGMFCGFVLMWIYTKLFEYYSGDTLTQMIPKIVGKLIGY
PLNVIYIFYFIYIAARVLRDFGELITGTFLPKTPLIIVIGSFMLVIVYCLHGGIEVFGRMGEIFFPFLFLVAILTWAIVY
SSQVVDIEQLAPVLEKGFGPVWEAAFPLVITFPFGEMVLFMMFWPALHDSRKVKKLGMVVVLVAGILLTVNTISILSVIG
PNLVKMKTYPLLTIVRMASIGNLIERIDAAIIITMMIGGFFKVGSFLYGAAVGTAQLFRLKSYRSIVVVFGAVVVLLSIM
IATNYMEHEEIGIKKVPIFLHIPLQIVIPVILLVIAMIRKRIQS

Sequences:

>Translated_364_residues
MMREKIGIMQLFYIMMAFEVGSTVIYGLGVDAKQDAWLVILVGMFCGFVLMWIYTKLFEYYSGDTLTQMIPKIVGKLIGY
PLNVIYIFYFIYIAARVLRDFGELITGTFLPKTPLIIVIGSFMLVIVYCLHGGIEVFGRMGEIFFPFLFLVAILTWAIVY
SSQVVDIEQLAPVLEKGFGPVWEAAFPLVITFPFGEMVLFMMFWPALHDSRKVKKLGMVVVLVAGILLTVNTISILSVIG
PNLVKMKTYPLLTIVRMASIGNLIERIDAAIIITMMIGGFFKVGSFLYGAAVGTAQLFRLKSYRSIVVVFGAVVVLLSIM
IATNYMEHEEIGIKKVPIFLHIPLQIVIPVILLVIAMIRKRIQS
>Mature_364_residues
MMREKIGIMQLFYIMMAFEVGSTVIYGLGVDAKQDAWLVILVGMFCGFVLMWIYTKLFEYYSGDTLTQMIPKIVGKLIGY
PLNVIYIFYFIYIAARVLRDFGELITGTFLPKTPLIIVIGSFMLVIVYCLHGGIEVFGRMGEIFFPFLFLVAILTWAIVY
SSQVVDIEQLAPVLEKGFGPVWEAAFPLVITFPFGEMVLFMMFWPALHDSRKVKKLGMVVVLVAGILLTVNTISILSVIG
PNLVKMKTYPLLTIVRMASIGNLIERIDAAIIITMMIGGFFKVGSFLYGAAVGTAQLFRLKSYRSIVVVFGAVVVLLSIM
IATNYMEHEEIGIKKVPIFLHIPLQIVIPVILLVIAMIRKRIQS

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40833; Mature: 40833

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]