Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
---|---|
Accession | NC_009674 |
Length | 4,087,024 |
Click here to switch to the map view.
The map label for this gene is yndM [H]
Identifier: 152977326
GI number: 152977326
Start: 3709847
End: 3710335
Strand: Reverse
Name: yndM [H]
Synonym: Bcer98_3651
Alternate gene names: 152977326
Gene position: 3710335-3709847 (Counterclockwise)
Preceding gene: 152977327
Following gene: 152977323
Centisome position: 90.78
GC content: 35.17
Gene sequence:
>489_bases ATGAAACATATTGTTGCTTTATTGATTAAGTATATGGCAATTAGTGCTGTATTGCTTATAGTACTAGGTATTTTCTGGGA CGTTTCAGTTCCTAGAGTTTTGTTTATCTCATTAGTCATTACAGGAGCAGCCTATTTAATTGGAGATTTATTTGTTCTAT CTAAGTATGGAAATACAGTTGCTACCATTGTGGATTTCGGTTTAAGTTTTTTCGGAATTTGGGTATTAGCATATCTTCTT ACAGGTATTGATGCAACTCGGAGTCTTACTGCATCTTCGTTTTGGGCAGCACTTCTGATTGGGATAGTAGAAGTGTTCTT CCATATCTATATGAAGAGAATGGTTTTAAAGGAAGAAGAGCAGGTGCTGAACTCTCCTAAGAAGTATCGAGGAGCATACG CTACAGAGTTTTCAGATGAATATATAGACCGTTCTAAAATAAGAAAAGAACAATTGCTTGAAAAAGTAGAGAATCGCAAG AAAGAATAG
Upstream 100 bases:
>100_bases GTGATGGTTGCAATTTCCTGTATGCTTTTATGAAATCAACACAATCTAGTACTGGGTAAAAATATGATTCCATATGGAAG TTAAAAATGGAGGATAATCA
Downstream 100 bases:
>100_bases AAAATAAAAGGGATGGTAGTTGTCACCACCCCTTTTATTTTTATAAACTACCTATTTTTATTCCGATACATGCAAGTATG ATTCCGCTGATATAGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKHIVALLIKYMAISAVLLIVLGIFWDVSVPRVLFISLVITGAAYLIGDLFVLSKYGNTVATIVDFGLSFFGIWVLAYLL TGIDATRSLTASSFWAALLIGIVEVFFHIYMKRMVLKEEEQVLNSPKKYRGAYATEFSDEYIDRSKIRKEQLLEKVENRK KE
Sequences:
>Translated_162_residues MKHIVALLIKYMAISAVLLIVLGIFWDVSVPRVLFISLVITGAAYLIGDLFVLSKYGNTVATIVDFGLSFFGIWVLAYLL TGIDATRSLTASSFWAALLIGIVEVFFHIYMKRMVLKEEEQVLNSPKKYRGAYATEFSDEYIDRSKIRKEQLLEKVENRK KE >Mature_162_residues MKHIVALLIKYMAISAVLLIVLGIFWDVSVPRVLFISLVITGAAYLIGDLFVLSKYGNTVATIVDFGLSFFGIWVLAYLL TGIDATRSLTASSFWAALLIGIVEVFFHIYMKRMVLKEEEQVLNSPKKYRGAYATEFSDEYIDRSKIRKEQLLEKVENRK KE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019649 [H]
Pfam domain/function: PF10710 DUF2512 [H]
EC number: NA
Molecular weight: Translated: 18435; Mature: 18435
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIVALLIKYMAISAVLLIVLGIFWDVSVPRVLFISLVITGAAYLIGDLFVLSKYGNTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ATIVDFGLSFFGIWVLAYLLTGIDATRSLTASSFWAALLIGIVEVFFHIYMKRMVLKEEE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLNSPKKYRGAYATEFSDEYIDRSKIRKEQLLEKVENRKKE HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKHIVALLIKYMAISAVLLIVLGIFWDVSVPRVLFISLVITGAAYLIGDLFVLSKYGNTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ATIVDFGLSFFGIWVLAYLLTGIDATRSLTASSFWAALLIGIVEVFFHIYMKRMVLKEEE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLNSPKKYRGAYATEFSDEYIDRSKIRKEQLLEKVENRKKE HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]