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The map label for this gene is yusF [H]

Identifier: 152977264

GI number: 152977264

Start: 3644283

End: 3644627

Strand: Reverse

Name: yusF [H]

Synonym: Bcer98_3585

Alternate gene names: 152977264

Gene position: 3644627-3644283 (Counterclockwise)

Preceding gene: 152977265

Following gene: 152977263

Centisome position: 89.18

GC content: 35.36

Gene sequence:

>345_bases
ATGGTTTATGTAGAAAAGGTCATTATTGTAGAAGGTAAATCAGATAGAAGAAAGATTGAATCTATTATTCGAGAACCGGT
GGAAATTGTTTGTACAAATGGTACAATTGGTTTGTCGAAAATGGATGAGCTCATTGATCAGTTTTTTGATAAAGAAGTAT
ATGTGCTAGTGGATGCTGATGATGCAGGAGAAAAGCTTCGCAAGCAATTTCGTAAGGAATTTCCGCAGGCTGAACATATT
TATATTGATCGTTCATATCGTGAAGTAGCAACTGCACCGTCTTCACATTTAGCAAATGTATTATGGGGAGCTGACATTGA
TGTTTATACAGAATATTTACGGTAA

Upstream 100 bases:

>100_bases
TTTCTTTGTAAAAATAAACAGGAAACAAGATGGGAATATCGAATATACTATATACGAAAGTAAGGTTGTTTTATAGTATA
TGGTGATCGGGTGATGACAC

Downstream 100 bases:

>100_bases
GGAATGATGATAGAAGTGATTGACTGGACAGGTGCTGAAGCCACAAATCTAATAGTGAATCAAGAAAAAACAGTGTTATA
TGTATATACTCCAATGTGTG

Product: TOPRIM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MVYVEKVIIVEGKSDRRKIESIIREPVEIVCTNGTIGLSKMDELIDQFFDKEVYVLVDADDAGEKLRKQFRKEFPQAEHI
YIDRSYREVATAPSSHLANVLWGADIDVYTEYLR

Sequences:

>Translated_114_residues
MVYVEKVIIVEGKSDRRKIESIIREPVEIVCTNGTIGLSKMDELIDQFFDKEVYVLVDADDAGEKLRKQFRKEFPQAEHI
YIDRSYREVATAPSSHLANVLWGADIDVYTEYLR
>Mature_114_residues
MVYVEKVIIVEGKSDRRKIESIIREPVEIVCTNGTIGLSKMDELIDQFFDKEVYVLVDADDAGEKLRKQFRKEFPQAEHI
YIDRSYREVATAPSSHLANVLWGADIDVYTEYLR

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 13227; Mature: 13227

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVEKVIIVEGKSDRRKIESIIREPVEIVCTNGTIGLSKMDELIDQFFDKEVYVLVDAD
CEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECC
DAGEKLRKQFRKEFPQAEHIYIDRSYREVATAPSSHLANVLWGADIDVYTEYLR
CHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MVYVEKVIIVEGKSDRRKIESIIREPVEIVCTNGTIGLSKMDELIDQFFDKEVYVLVDAD
CEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECC
DAGEKLRKQFRKEFPQAEHIYIDRSYREVATAPSSHLANVLWGADIDVYTEYLR
CHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]