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The map label for this gene is sufB [H]

Identifier: 152977254

GI number: 152977254

Start: 3635080

End: 3636477

Strand: Reverse

Name: sufB [H]

Synonym: Bcer98_3575

Alternate gene names: 152977254

Gene position: 3636477-3635080 (Counterclockwise)

Preceding gene: 152977255

Following gene: 152977253

Centisome position: 88.98

GC content: 38.63

Gene sequence:

>1398_bases
ATGGCGAAACAAATGCCAGATATCGGCGATTACAAATATGGTTTCAAGGATAAAGACGTTTCGATTTTCCGTGCAGGTCG
CGGTTTAACAAAAGAAATCGTAGAAGAGATTTCACATATGAAAGAAGAACCAAAGTGGATGTTAGACTTCCGCTTGAAAG
CACTGGATAAGTTCTATGAAATGCCAATGCCACAATGGGGCGGCGATTTAAACGATTTAGATTTCGATGAAATTACGTAC
TACGTAAAACCATCTGAGAAATCTGAGAAGTCTTGGGATGAAGTACCTGATGAAATTAAAGCAACATTTGATAAATTAGG
TATTCCAGAAGCTGAGCAAAAATATTTAGCGGGTGTATCAGCGCAGTATGAATCTGAAGTTGTATATCACAACATGAAAG
AAGACCTAGAAGCGCTAGGAATTGTCTTCAAAGATACAGATAGCGCATTAAAAGAAAACGAAGATATTTTCCGTGAGCAT
TTCGGAAAAGTAATCCCGCCAACTGACAACAAGTTTGCAGCATTAAACTCTGCAGTTTGGTCTGGTGGATCATTTATCTA
CGTTCCAAAAGGTGTAAAAGTAGATACACCACTTCAAGCGTATTTCCGTATTAACTCTGAAAATATGGGACAATTCGAGC
GTACGCTTATTATCGTAGATGAAGGTGCGCACGTACACTACGTTGAAGGATGTACAGCTCCTGTTTACACTACTAACTCA
CTTCACAGTGCGGTAGTAGAAATCATCATTAAGAAAGATGCATATTGCCGTTATACAACAATCCAAAACTGGGCAAATAA
CGTATACAATCTCGTTACAAAACGTGCGGTTTGTGAAGAAAACGCAACGATGGAATGGATTGACGGTAACATCGGTTCTA
AATTAACGATGAAATACCCAGCTGTTATTTTAAAAGGTGAAGGTGCACGCGGTTTAACATTATCTATCGCGATTGCTGGT
AAAGGCCAACATCAAGATGCTGGTGCGAAAATGATTCACTTAGCACCAAATACATCTTCAACAATCGTATCTAAATCGAT
TGCAAAACATGGTGGTAAAGTAACATACCGTGGTATCGTACATTTCGGACCAAAAGCGAAAAACTCTCGCTCTAACATCG
AGTGTGATACATTAATTATGGATAACCAATCTACATCTGATACAATTCCTTATAACGAAATCAAAAACGATTACGTTTCA
CTTGAGCACGAAGCGAAAGTATCAAAAGTATCAGAAGAACAATTATTCTATCTAATGAGCCGCGGTATTTCTGAGCAAGA
AGCAACAGAAATGATTGTAATGGGCTTCATCGAGCCATTCACTCGCGAACTTCCAATGGAATACGCAGTAGAAATGAACC
GTCTTATCAAATTTGAAATGGAAGGTTCTATCGGTTAA

Upstream 100 bases:

>100_bases
TGCAACATTAGCTTGGAAAGCGTTAGAAAAAGGCTTAAACGAAGAAAAGTAATGTGAGAAGTTCCTAAAGACGGAGTTAT
CTAAGGAGGGACATACCAAC

Downstream 100 bases:

>100_bases
TTTAAAAATAGAAGCGCCCTGCTTGGCAGGGTGCTTTTTTATGTGCAGTAAGAAAATATTGGCGATTTCAGCATGGAAAC
TCGGGTTGGGATTTCGAGTT

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKQMPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYEMPMPQWGGDLNDLDFDEITY
YVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREH
FGKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAG
KGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVS
LEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKQMPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYEMPMPQWGGDLNDLDFDEITY
YVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREH
FGKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAG
KGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVS
LEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKQMPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYEMPMPQWGGDLNDLDFDEITYY
VKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHF
GKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSL
HSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAGK
GQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSL
EHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=478, Percent_Identity=40.7949790794979, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=27.9220779220779, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52491; Mature: 52360

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQMPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYE
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKQMPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYE
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]