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The map label for this gene is gapB [H]

Identifier: 152976965

GI number: 152976965

Start: 3334670

End: 3335698

Strand: Reverse

Name: gapB [H]

Synonym: Bcer98_3268

Alternate gene names: 152976965

Gene position: 3335698-3334670 (Counterclockwise)

Preceding gene: 152976966

Following gene: 152976964

Centisome position: 81.62

GC content: 36.83

Gene sequence:

>1029_bases
ATGATTCGTGTGGCAATTAATGGTTTTGGACGTATTGGAAGAATGGTATTTCGTCAGGCAATAAAAGAAAGCGCATTCGA
AATTGTGGCGATTAATGCAAGCTATCCAGCGGAAACATTAGCACATTTGATTAAGTATGATACAATTCATGGAAAGTTTG
ATGGAACAATTGAAGCATTTGAAGATCATTTACTAGTGGATGGAAAAATGATTCGCCTTCTAAACAATCGCGATCCAAAA
GAATTGCCTTGGAAAGAGCTAGGTGTAGAAGTTGTAATTGAAGCAACTGGTAAATTTAATGCAAAAGAAAAAGCGATGCT
TCATGTAGAAGCTGGTGCGAAAAAAGTTATTTTAACAGCGCCTGGTAAAAATGAAGATGTAACAGTTGTAGTTGGTGTAA
ATGAAGAACAATTAGATGTAACAAAACATACAGTTATTTCAAATGCATCTTGTACAACAAACTGTTTAGCACCTGTTGTG
AAGGTGTTAGATGAACAGTTCGGAATTGAAAACGGTTTAATGACAACTGTTCACGCTTATACAAATGACCAAAAAAATAT
TGATAATCCACATAAAGATTTACGAAGAGCACGCGCTTGTGGGCAGTCTATCATCCCTACAACAACAGGAGCTGCAAAAG
CATTAGCGAAAGTTCTTCCGCATTTAAATGGAAAACTTCACGGTATGGCGCTTCGCGTGCCAACACCAAACGTGTCACTT
GTTGACTTAGTAGTTGATTTAAAACGTGATGTAACAGTTGAGGACATTAATGAAGCGTTTAAAACAGTTGCAAATGGTAC
AATGAAAGGAATTATTGAGTTCAGTGAAGAGCCTTTAGTTTCTATTGATTTCAATACGAATACACACTCAGCGATTATTG
ATGGTTTATCCACAATGGTAATGGCTGAACGTAAAGTGAAAGTTCTTGCTTGGTACGATAATGAGTGGGGCTACTCTCGC
CGTGTTGTCGATCTTGTGAAATTAGTTACTGCAGAACTAGCAAAACAAGAAAATGTTCAACATATTTAA

Upstream 100 bases:

>100_bases
AAATTAATGAAAATGTTTAGTGACATATTCCTTTTTTATGTTATACTATTATTGGGATTGGAGATAAATAGTATAACGCA
TTCAAGGGGGATAACATATT

Downstream 100 bases:

>100_bases
GTGAAAAAATGAGAAGGCAAGCAATTGCTTGCCTTCTTTTTCCTTTTCAAAAAAATGAAAAAGTTATATGGATATATTAT
TAAGTAAGATACATACTGAA

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase; GAPDH [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPAETLAHLIKYDTIHGKFDGTIEAFEDHLLVDGKMIRLLNNRDPK
ELPWKELGVEVVIEATGKFNAKEKAMLHVEAGAKKVILTAPGKNEDVTVVVGVNEEQLDVTKHTVISNASCTTNCLAPVV
KVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL
VDLVVDLKRDVTVEDINEAFKTVANGTMKGIIEFSEEPLVSIDFNTNTHSAIIDGLSTMVMAERKVKVLAWYDNEWGYSR
RVVDLVKLVTAELAKQENVQHI

Sequences:

>Translated_342_residues
MIRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPAETLAHLIKYDTIHGKFDGTIEAFEDHLLVDGKMIRLLNNRDPK
ELPWKELGVEVVIEATGKFNAKEKAMLHVEAGAKKVILTAPGKNEDVTVVVGVNEEQLDVTKHTVISNASCTTNCLAPVV
KVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL
VDLVVDLKRDVTVEDINEAFKTVANGTMKGIIEFSEEPLVSIDFNTNTHSAIIDGLSTMVMAERKVKVLAWYDNEWGYSR
RVVDLVKLVTAELAKQENVQHI
>Mature_342_residues
MIRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPAETLAHLIKYDTIHGKFDGTIEAFEDHLLVDGKMIRLLNNRDPK
ELPWKELGVEVVIEATGKFNAKEKAMLHVEAGAKKVILTAPGKNEDVTVVVGVNEEQLDVTKHTVISNASCTTNCLAPVV
KVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL
VDLVVDLKRDVTVEDINEAFKTVANGTMKGIIEFSEEPLVSIDFNTNTHSAIIDGLSTMVMAERKVKVLAWYDNEWGYSR
RVVDLVKLVTAELAKQENVQHI

Specific function: More active in anabolism [H]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=338, Percent_Identity=46.7455621301775, Blast_Score=315, Evalue=4e-86,
Organism=Homo sapiens, GI7657116, Length=330, Percent_Identity=45.4545454545455, Blast_Score=309, Evalue=3e-84,
Organism=Escherichia coli, GI1788079, Length=326, Percent_Identity=52.760736196319, Blast_Score=350, Evalue=6e-98,
Organism=Escherichia coli, GI1789295, Length=327, Percent_Identity=46.4831804281346, Blast_Score=318, Evalue=3e-88,
Organism=Caenorhabditis elegans, GI17534677, Length=333, Percent_Identity=48.6486486486487, Blast_Score=330, Evalue=7e-91,
Organism=Caenorhabditis elegans, GI17534679, Length=333, Percent_Identity=48.948948948949, Blast_Score=330, Evalue=7e-91,
Organism=Caenorhabditis elegans, GI32566163, Length=336, Percent_Identity=48.2142857142857, Blast_Score=327, Evalue=7e-90,
Organism=Caenorhabditis elegans, GI17568413, Length=336, Percent_Identity=48.2142857142857, Blast_Score=327, Evalue=8e-90,
Organism=Saccharomyces cerevisiae, GI6322409, Length=331, Percent_Identity=48.3383685800604, Blast_Score=335, Evalue=9e-93,
Organism=Saccharomyces cerevisiae, GI6321631, Length=331, Percent_Identity=48.3383685800604, Blast_Score=328, Evalue=1e-90,
Organism=Saccharomyces cerevisiae, GI6322468, Length=331, Percent_Identity=47.7341389728097, Blast_Score=327, Evalue=2e-90,
Organism=Drosophila melanogaster, GI17933600, Length=336, Percent_Identity=46.7261904761905, Blast_Score=312, Evalue=2e-85,
Organism=Drosophila melanogaster, GI18110149, Length=336, Percent_Identity=46.7261904761905, Blast_Score=312, Evalue=2e-85,
Organism=Drosophila melanogaster, GI85725000, Length=334, Percent_Identity=46.1077844311377, Blast_Score=309, Evalue=1e-84,
Organism=Drosophila melanogaster, GI22023983, Length=334, Percent_Identity=46.1077844311377, Blast_Score=309, Evalue=1e-84,
Organism=Drosophila melanogaster, GI19922412, Length=343, Percent_Identity=45.1895043731778, Blast_Score=293, Evalue=1e-79,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 740 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1660 Molecules/Cell In: Growth Phase, Min

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.59 [H]

Molecular weight: Translated: 37709; Mature: 37709

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPAETLAHLIKYDTIHGKFDGTIEAF
CEEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHH
EDHLLVDGKMIRLLNNRDPKELPWKELGVEVVIEATGKFNAKEKAMLHVEAGAKKVILTA
HCCEEECCHHEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEC
PGKNEDVTVVVGVNEEQLDVTKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAY
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
TNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCHH
VDLVVDLKRDVTVEDINEAFKTVANGTMKGIIEFSEEPLVSIDFNTNTHSAIIDGLSTMV
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHH
MAERKVKVLAWYDNEWGYSRRVVDLVKLVTAELAKQENVQHI
HHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPAETLAHLIKYDTIHGKFDGTIEAF
CEEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHH
EDHLLVDGKMIRLLNNRDPKELPWKELGVEVVIEATGKFNAKEKAMLHVEAGAKKVILTA
HCCEEECCHHEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEC
PGKNEDVTVVVGVNEEQLDVTKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAY
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
TNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCHH
VDLVVDLKRDVTVEDINEAFKTVANGTMKGIIEFSEEPLVSIDFNTNTHSAIIDGLSTMV
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHH
MAERKVKVLAWYDNEWGYSRRVVDLVKLVTAELAKQENVQHI
HHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 10799476 [H]