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The map label for this gene is yhbJ [H]

Identifier: 152976952

GI number: 152976952

Start: 3321963

End: 3322616

Strand: Reverse

Name: yhbJ [H]

Synonym: Bcer98_3255

Alternate gene names: 152976952

Gene position: 3322616-3321963 (Counterclockwise)

Preceding gene: 152976954

Following gene: 152976951

Centisome position: 81.3

GC content: 36.09

Gene sequence:

>654_bases
ATGAATCAATTTCGAAGAATGGTGATGATCAACATCATCACATTAATCGTATTAGTTGGCGGCGGTATCGGTGGTTACTA
CTACTACAACCAATCCGAAAACTATTTAAAGACAGAGAATGCGAAAATTGATGGGAAAGTAATTCCAATTGCATCACCAG
TAGCAGGGAAATTAACAGAATGGCAAGCAGAAGTAGGTAAAAGCTACAATGAAAATGATAAACTAGGTGCCGTTACGACA
TCAGGTTCAAATGGTGAACAAACAATGGATGTGACAATTCCACAAGGTGCAACAGTTGTACAATCTAATGCAACAACAAA
TGCTTTTGTTGGGGCAGGTAGCCCAATTGCATACGCATTTGATATGAATGATCTATGGGTAACAGCAAACATTGAAGAAA
CAGATATTGATGATGTACAAAAAGGACAAGAAGTAGATGTATATGTTGATGCGTATCCTGATACAACATTAACAGGAAAA
GTAGAACAAATTGGTTTAACAACAGCAAATACGTTCTCGATGTTACCATCAAGCAATTCAACAGCAAATTATACAAAAGT
GACACAAGTAGTACCGGTTAAAATTTCTTTAGACCACAGTAAGTCAGTAAATATTGTTCCTGGAATGAATGTGACAGTTC
GTATTCATAAATAA

Upstream 100 bases:

>100_bases
TTTTGTTTAATTGTTAATATAATTAATAATTAAACAATATAAACAAAAGGATAGAAATCGTTTAGAGAAAAATTATATTC
GATATAAGGAGAGAAAAGCA

Downstream 100 bases:

>100_bases
GGGGGGGAGATAAAATGTCCTCATCTTTAATAGTAGGATATGCTATATTTTGTATTATAGTCTTCTTCCTGGTAAATCGT
CTTTTTAGAAAGAAAAAAAC

Product: multidrug resistance protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNQFRRMVMINIITLIVLVGGGIGGYYYYNQSENYLKTENAKIDGKVIPIASPVAGKLTEWQAEVGKSYNENDKLGAVTT
SGSNGEQTMDVTIPQGATVVQSNATTNAFVGAGSPIAYAFDMNDLWVTANIEETDIDDVQKGQEVDVYVDAYPDTTLTGK
VEQIGLTTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK

Sequences:

>Translated_217_residues
MNQFRRMVMINIITLIVLVGGGIGGYYYYNQSENYLKTENAKIDGKVIPIASPVAGKLTEWQAEVGKSYNENDKLGAVTT
SGSNGEQTMDVTIPQGATVVQSNATTNAFVGAGSPIAYAFDMNDLWVTANIEETDIDDVQKGQEVDVYVDAYPDTTLTGK
VEQIGLTTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
>Mature_217_residues
MNQFRRMVMINIITLIVLVGGGIGGYYYYNQSENYLKTENAKIDGKVIPIASPVAGKLTEWQAEVGKSYNENDKLGAVTT
SGSNGEQTMDVTIPQGATVVQSNATTNAFVGAGSPIAYAFDMNDLWVTANIEETDIDDVQKGQEVDVYVDAYPDTTLTGK
VEQIGLTTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788711, Length=110, Percent_Identity=34.5454545454545, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789041, Length=95, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 23438; Mature: 23438

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFRRMVMINIITLIVLVGGGIGGYYYYNQSENYLKTENAKIDGKVIPIASPVAGKLTE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCEECCEEEEECCCCCCCHHH
WQAEVGKSYNENDKLGAVTTSGSNGEQTMDVTIPQGATVVQSNATTNAFVGAGSPIAYAF
HHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEE
DMNDLWVTANIEETDIDDVQKGQEVDVYVDAYPDTTLTGKVEQIGLTTANTFSMLPSSNS
ECCCEEEEECCCCCCCHHHHCCCEEEEEEECCCCCEECCCEEEEECEECCEEEECCCCCC
TANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
CCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEEEEC
>Mature Secondary Structure
MNQFRRMVMINIITLIVLVGGGIGGYYYYNQSENYLKTENAKIDGKVIPIASPVAGKLTE
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCEECCEEEEECCCCCCCHHH
WQAEVGKSYNENDKLGAVTTSGSNGEQTMDVTIPQGATVVQSNATTNAFVGAGSPIAYAF
HHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEE
DMNDLWVTANIEETDIDDVQKGQEVDVYVDAYPDTTLTGKVEQIGLTTANTFSMLPSSNS
ECCCEEEEECCCCCCCHHHHCCCEEEEEEECCCCCEECCCEEEEECEECCEEEECCCCCC
TANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIHK
CCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]