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The map label for this gene is yvcP [H]

Identifier: 152976855

GI number: 152976855

Start: 3204953

End: 3205660

Strand: Reverse

Name: yvcP [H]

Synonym: Bcer98_3154

Alternate gene names: 152976855

Gene position: 3205660-3204953 (Counterclockwise)

Preceding gene: 152976856

Following gene: 152976854

Centisome position: 78.44

GC content: 35.88

Gene sequence:

>708_bases
ATGTATAAAATATTAATTGTAGAAGATGATGAGAAAATTGCGGGAATATTAGAGGAACATTTAAAAAGATATGACTATCA
ATCATTTAGAGCAAATGATTTACGTCATATAAAAGATGAGTTTGTAAAAGTAAATCCACATCTTGTATTACTGGATATTA
ATTTACCTTATTTTGATGGCTTCTATTGGTGTCGGCAAATCCGCAGTGTATCGAATGCACCGATTATTTTCGTTTCTGCG
AGAACAGGAGAAATGGATCAAGTAATGGCGATTGAGAATGGCGGGGATGATTATATTACAAAGCCATTTCATTTAGATAT
CGTCATGGCAAAGGTAAAAAGTGCACTTCGCCGTGGGTATGGGGAGTATGCTTCTGCGGCAGAGAATGATTGTTTAGGTG
TAAATGGACTGTTGTTATTCCCATCTCAGCACATTATAGAGTGGCAGGGGCAACAAACGGAACTGACAAAAAATGAATTT
TACTTATTAGAGTGTTTAATGAAACAAGCAAATCAATATGTAACGCGTGAAGAGTTGTTAGAAGCTCTATGGGATGAAGT
AGCTTTTGTTGATGATAATACATTAACAGTAAATGTAAAGCGAGTAAGGAAGAAATTAGAGGAGTTAGGCATTAAAAATG
CAATTGTAACGAAACGTGGATATGGTTATGCGCTTCTTACAGAGTGGAGCGAAGGACATGAAGGTTAA

Upstream 100 bases:

>100_bases
TAAGATTTATAAAGGAAAAAATCCCCACCAAATAAATTTTCAATTTATAATGGAAAAAGGAGTAATTTTAGAACAATTCT
TTTATGGGGAGAAAAAGAAC

Downstream 100 bases:

>100_bases
AACGTACCTAATAGATCGCTTTTCTTTAATTTTATCTTATATTGTAAGCCTTTGTTTATTTGGACTCGTATTGCAGTTGC
AAAGTCTGTTAGAAAAAAGA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MYKILIVEDDEKIAGILEEHLKRYDYQSFRANDLRHIKDEFVKVNPHLVLLDINLPYFDGFYWCRQIRSVSNAPIIFVSA
RTGEMDQVMAIENGGDDYITKPFHLDIVMAKVKSALRRGYGEYASAAENDCLGVNGLLLFPSQHIIEWQGQQTELTKNEF
YLLECLMKQANQYVTREELLEALWDEVAFVDDNTLTVNVKRVRKKLEELGIKNAIVTKRGYGYALLTEWSEGHEG

Sequences:

>Translated_235_residues
MYKILIVEDDEKIAGILEEHLKRYDYQSFRANDLRHIKDEFVKVNPHLVLLDINLPYFDGFYWCRQIRSVSNAPIIFVSA
RTGEMDQVMAIENGGDDYITKPFHLDIVMAKVKSALRRGYGEYASAAENDCLGVNGLLLFPSQHIIEWQGQQTELTKNEF
YLLECLMKQANQYVTREELLEALWDEVAFVDDNTLTVNVKRVRKKLEELGIKNAIVTKRGYGYALLTEWSEGHEG
>Mature_235_residues
MYKILIVEDDEKIAGILEEHLKRYDYQSFRANDLRHIKDEFVKVNPHLVLLDINLPYFDGFYWCRQIRSVSNAPIIFVSA
RTGEMDQVMAIENGGDDYITKPFHLDIVMAKVKSALRRGYGEYASAAENDCLGVNGLLLFPSQHIIEWQGQQTELTKNEF
YLLECLMKQANQYVTREELLEALWDEVAFVDDNTLTVNVKRVRKKLEELGIKNAIVTKRGYGYALLTEWSEGHEG

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=32.8828828828829, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=31.304347826087, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=30.3964757709251, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=29.9107142857143, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=28.936170212766, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=28.3842794759825, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=29.9559471365639, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=29.6137339055794, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1790863, Length=225, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=26.5765765765766, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=30.9734513274336, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=29.9107142857143, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=30.0884955752212, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=28.2700421940928, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=31.0344827586207, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27172; Mature: 27172

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKILIVEDDEKIAGILEEHLKRYDYQSFRANDLRHIKDEFVKVNPHLVLLDINLPYFDG
CEEEEEEECCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHEEECCEEEEEECCCCHHHH
FYWCRQIRSVSNAPIIFVSARTGEMDQVMAIENGGDDYITKPFHLDIVMAKVKSALRRGY
HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCC
GEYASAAENDCLGVNGLLLFPSQHIIEWQGQQTELTKNEFYLLECLMKQANQYVTREELL
CHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
EALWDEVAFVDDNTLTVNVKRVRKKLEELGIKNAIVTKRGYGYALLTEWSEGHEG
HHHHHHEEEECCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MYKILIVEDDEKIAGILEEHLKRYDYQSFRANDLRHIKDEFVKVNPHLVLLDINLPYFDG
CEEEEEEECCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHEEECCEEEEEECCCCHHHH
FYWCRQIRSVSNAPIIFVSARTGEMDQVMAIENGGDDYITKPFHLDIVMAKVKSALRRGY
HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCC
GEYASAAENDCLGVNGLLLFPSQHIIEWQGQQTELTKNEFYLLECLMKQANQYVTREELL
CHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
EALWDEVAFVDDNTLTVNVKRVRKKLEELGIKNAIVTKRGYGYALLTEWSEGHEG
HHHHHHEEEECCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]