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The map label for this gene is yrrC [H]

Identifier: 152976808

GI number: 152976808

Start: 3146095

End: 3148413

Strand: Reverse

Name: yrrC [H]

Synonym: Bcer98_3106

Alternate gene names: 152976808

Gene position: 3148413-3146095 (Counterclockwise)

Preceding gene: 152976809

Following gene: 152976807

Centisome position: 77.03

GC content: 38.77

Gene sequence:

>2319_bases
ATGGATTTGTTTGAGGAAGAGAGAAAGTTTATAAAAGCGCAAGTTCTTCATACTATTTTCCACAACGAAGAAAACCTCTA
TTCCGTTGTCAGTATGAAAGTCATTGAAACAAATGAAGCATATGACGAAAAAAAAGTAATGATCAACGGTCATTTTCCCC
GTATGCATGAAGATGAAGTATTTACATTAACAGGGTATTTTAAAGAGCATCCTAAATATGGGAAGCAATATCAAGTTGAA
ACATTTAAAAAAGAATTGCCCCAAACGAAAACAGGAATGGTGCAATATTTAGCGAGCGATTTATTTAAAGGAATTGGGAA
GCGAACAGCTGAAAAAATTGTCAATCATCTTGGAGAACACGCCATTTCTAAAATTATGGATGATCCGGCTGCGCTAGAAG
GTGTCGTCAATAAGCAAAAAGCGCAAGAAATATATGAGACGATCATTGAGCATCAAGGGCTTGAAAAAGTGATGAGCTTT
TTAAATGGTTATGGATTTGGGACAAAGCTTTCCATTAAAATTTATCAGCAATATAAAGAAATGACACTAGAAGTTATTCG
AAATAATCCGTACCAGTTGATTGAAGAAGTTGACGGAATTGGCTTTGGAAGAGCAGACGATATAGGACGTGCTCTTGGGA
TATCAGGAAATCATAATGATCGTGTACGAGCGGGATGTTTTTATACGTTGGAGAATGTATCGCTTCAATATGGTCATGTT
TATATGGAGAAGGAGCAGCTTGTACGTGAAACGATGTCTCTTTTAAATAACCGAGAAGGGACTGTGACGGAAGAAGATAT
TGTGCAATGCATCGAAATGATGCAAGGCGAAGGGAAAATCATTATAGAGGAAGAGCGTATTTATTTGGCTTCTTTATATT
ATTCTGAGAAAGGTGTTGTGAAGTCGATTCATCGCCTGATGAGCCAAAAAGAAACGCCGTCATTTCCCGAGGCAGAAGTG
TTGTTAACGTTAGGTAAGATCGAAGAGCAGATGAAAGTACAGTATGCACCGCTTCAGCAAGAGGCGATTCAAACAGCACT
TCATCAACCGATGATGCTGTTAACCGGTGGCCCAGGAACAGGAAAGACAACAGTTATTAAAGGAATTGTCGAAATGTATG
CATCGCTACATGGATTATCGTTAAATCCTAAAGATTATAGCGATGATAATCCATTTCCGATTTTATTAACAGCTCCAACA
GGTCGTGCGGCAAAGCGAATGAGCGAATCAACAGGTCTTCCTGCATGTACAATTCACCGTTTGCTTGGTTGGACGCCCGA
AGGCTCGTTTCAGCGAAATGAAACAGATCCGGTGCAGGGGAAACTTCTTATTGTCGATGAATTTTCTATGGTCGATATTT
GGCTTGCAAATCAGCTTTTGAAATCATTGCCGACAAATATGCAAGTCATTATTGTTGGCGATGAAGATCAATTGCCATCT
GTAGGACCGGGACAAGTATTAAAAGATTTATTAAACGCCGGTATCATTCCAACGGTAAAACTGACCGAAATTTATCGGCA
AGCTGAAGGGTCATCTGTTGTTCAACTTGCTCATGCGATAAAGAATGGAACATTACCGCCAGATGTAACGAAAAATAAAC
AAGATCGTTCCTTTATTGCGTGCACGGGGAATCAAATTGTTGATGTTGTAAAACGAGTGTGTGAAAGCGCAAAAGTAAAG
GGATTTAGTGCAAAAGATGTGCAAGTGTTAGCACCTATGTATCGCGGATCGGCAGGGATTAATGTGTTAAATGAGGCATT
GCAACAAGTCTTTAACCCGAAACAAGAAAAGAGTAAAGAAATTGCTTATGGTGATGTTGTATATAGAAGAGGCGATAAGG
TTCTTCAATTAGTCAATCAACCGGAAAGTCAAGTGTTTAATGGAGATATTGGCGAAATTATTTCTATATTTTACGCGAAG
GAAAATGTAGAGCAACAAGATATGGTTGTTGTTTCATTTGATGGCATTGAAGTGACATATACGAAGGCTGATTTGAATCA
AATTACACATGCATATTGCTGCTCCATTCATAAGTCGCAAGGGAGTGAATTTCCGATTGTAATTATGCCGATTGTAAAAA
GTTATAACCGCATGTTGCGTCGGAATTTAATTTATACGGGTATTACAAGAAGTAAAAAGTTTTTGATTATCTGCGGAGAA
GAAGAAGCTTTTCGATCTGGAGTGAACCGTCTCGATGATGCCATGCGGCAAACAACTTTAGGAAGTCGTTTGCAAGAGGC
AAAAGGCGAAGCACAGATGGTTGTTATTAATGGAGAAGAAATGGACGTGGAAAACATTTCACCGTATGATTTTATGTAA

Upstream 100 bases:

>100_bases
GTTCCCCTCCATCTAAAGGTCAGTTAGGTGGGGGCTACTGCTCATTAGAGTACAGAAGTCGGAAAGGAGTAGCAGAGGAA
CGATGGAGAATCAACATGCC

Downstream 100 bases:

>100_bases
CGAGGTGAAATTATATAGTGAAGCTTTCAAGTGTATCATATTGAAAGTTGCTAACATGTATAAATGAATGCAGTTTGGAC
ATAATGGCGAATAGAATCTG

Product: RecD/TraA family helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MDLFEEERKFIKAQVLHTIFHNEENLYSVVSMKVIETNEAYDEKKVMINGHFPRMHEDEVFTLTGYFKEHPKYGKQYQVE
TFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIVNHLGEHAISKIMDDPAALEGVVNKQKAQEIYETIIEHQGLEKVMSF
LNGYGFGTKLSIKIYQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVSLQYGHV
YMEKEQLVRETMSLLNNREGTVTEEDIVQCIEMMQGEGKIIIEEERIYLASLYYSEKGVVKSIHRLMSQKETPSFPEAEV
LLTLGKIEEQMKVQYAPLQQEAIQTALHQPMMLLTGGPGTGKTTVIKGIVEMYASLHGLSLNPKDYSDDNPFPILLTAPT
GRAAKRMSESTGLPACTIHRLLGWTPEGSFQRNETDPVQGKLLIVDEFSMVDIWLANQLLKSLPTNMQVIIVGDEDQLPS
VGPGQVLKDLLNAGIIPTVKLTEIYRQAEGSSVVQLAHAIKNGTLPPDVTKNKQDRSFIACTGNQIVDVVKRVCESAKVK
GFSAKDVQVLAPMYRGSAGINVLNEALQQVFNPKQEKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIISIFYAK
ENVEQQDMVVVSFDGIEVTYTKADLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKFLIICGE
EEAFRSGVNRLDDAMRQTTLGSRLQEAKGEAQMVVINGEEMDVENISPYDFM

Sequences:

>Translated_772_residues
MDLFEEERKFIKAQVLHTIFHNEENLYSVVSMKVIETNEAYDEKKVMINGHFPRMHEDEVFTLTGYFKEHPKYGKQYQVE
TFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIVNHLGEHAISKIMDDPAALEGVVNKQKAQEIYETIIEHQGLEKVMSF
LNGYGFGTKLSIKIYQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVSLQYGHV
YMEKEQLVRETMSLLNNREGTVTEEDIVQCIEMMQGEGKIIIEEERIYLASLYYSEKGVVKSIHRLMSQKETPSFPEAEV
LLTLGKIEEQMKVQYAPLQQEAIQTALHQPMMLLTGGPGTGKTTVIKGIVEMYASLHGLSLNPKDYSDDNPFPILLTAPT
GRAAKRMSESTGLPACTIHRLLGWTPEGSFQRNETDPVQGKLLIVDEFSMVDIWLANQLLKSLPTNMQVIIVGDEDQLPS
VGPGQVLKDLLNAGIIPTVKLTEIYRQAEGSSVVQLAHAIKNGTLPPDVTKNKQDRSFIACTGNQIVDVVKRVCESAKVK
GFSAKDVQVLAPMYRGSAGINVLNEALQQVFNPKQEKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIISIFYAK
ENVEQQDMVVVSFDGIEVTYTKADLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKFLIICGE
EEAFRSGVNRLDDAMRQTTLGSRLQEAKGEAQMVVINGEEMDVENISPYDFM
>Mature_772_residues
MDLFEEERKFIKAQVLHTIFHNEENLYSVVSMKVIETNEAYDEKKVMINGHFPRMHEDEVFTLTGYFKEHPKYGKQYQVE
TFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIVNHLGEHAISKIMDDPAALEGVVNKQKAQEIYETIIEHQGLEKVMSF
LNGYGFGTKLSIKIYQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVSLQYGHV
YMEKEQLVRETMSLLNNREGTVTEEDIVQCIEMMQGEGKIIIEEERIYLASLYYSEKGVVKSIHRLMSQKETPSFPEAEV
LLTLGKIEEQMKVQYAPLQQEAIQTALHQPMMLLTGGPGTGKTTVIKGIVEMYASLHGLSLNPKDYSDDNPFPILLTAPT
GRAAKRMSESTGLPACTIHRLLGWTPEGSFQRNETDPVQGKLLIVDEFSMVDIWLANQLLKSLPTNMQVIIVGDEDQLPS
VGPGQVLKDLLNAGIIPTVKLTEIYRQAEGSSVVQLAHAIKNGTLPPDVTKNKQDRSFIACTGNQIVDVVKRVCESAKVK
GFSAKDVQVLAPMYRGSAGINVLNEALQQVFNPKQEKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIISIFYAK
ENVEQQDMVVVSFDGIEVTYTKADLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKFLIICGE
EEAFRSGVNRLDDAMRQTTLGSRLQEAKGEAQMVVINGEEMDVENISPYDFM

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32455236, Length=516, Percent_Identity=22.6744186046512, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1789182, Length=411, Percent_Identity=26.7639902676399, Blast_Score=112, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 86896; Mature: 86896

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFEEERKFIKAQVLHTIFHNEENLYSVVSMKVIETNEAYDEKKVMINGHFPRMHEDEV
CCCHHHHHHHHHHHHHHHHHCCCCHHEEHHEEEEEECCCCCCCCEEEEECCCCCCCCCCE
FTLTGYFKEHPKYGKQYQVETFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIVNHLGEH
EEEECHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISKIMDDPAALEGVVNKQKAQEIYETIIEHQGLEKVMSFLNGYGFGTKLSIKIYQQYKE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHHHHHHH
MTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVSLQYGHV
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEECEE
YMEKEQLVRETMSLLNNREGTVTEEDIVQCIEMMQGEGKIIIEEERIYLASLYYSEKGVV
EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCHH
KSIHRLMSQKETPSFPEAEVLLTLGKIEEQMKVQYAPLQQEAIQTALHQPMMLLTGGPGT
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCC
GKTTVIKGIVEMYASLHGLSLNPKDYSDDNPFPILLTAPTGRAAKRMSESTGLPACTIHR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHH
LLGWTPEGSFQRNETDPVQGKLLIVDEFSMVDIWLANQLLKSLPTNMQVIIVGDEDQLPS
HHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VGPGQVLKDLLNAGIIPTVKLTEIYRQAEGSSVVQLAHAIKNGTLPPDVTKNKQDRSFIA
CCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
CTGNQIVDVVKRVCESAKVKGFSAKDVQVLAPMYRGSAGINVLNEALQQVFNPKQEKSKE
ECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCC
IAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIISIFYAKENVEQQDMVVVSFDGIEVTY
CCHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEE
TKADLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKFLIICGE
EHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
EEAFRSGVNRLDDAMRQTTLGSRLQEAKGEAQMVVINGEEMDVENISPYDFM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLFEEERKFIKAQVLHTIFHNEENLYSVVSMKVIETNEAYDEKKVMINGHFPRMHEDEV
CCCHHHHHHHHHHHHHHHHHCCCCHHEEHHEEEEEECCCCCCCCEEEEECCCCCCCCCCE
FTLTGYFKEHPKYGKQYQVETFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIVNHLGEH
EEEECHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISKIMDDPAALEGVVNKQKAQEIYETIIEHQGLEKVMSFLNGYGFGTKLSIKIYQQYKE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHHHHHHH
MTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVSLQYGHV
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEECEE
YMEKEQLVRETMSLLNNREGTVTEEDIVQCIEMMQGEGKIIIEEERIYLASLYYSEKGVV
EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCHH
KSIHRLMSQKETPSFPEAEVLLTLGKIEEQMKVQYAPLQQEAIQTALHQPMMLLTGGPGT
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCC
GKTTVIKGIVEMYASLHGLSLNPKDYSDDNPFPILLTAPTGRAAKRMSESTGLPACTIHR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHH
LLGWTPEGSFQRNETDPVQGKLLIVDEFSMVDIWLANQLLKSLPTNMQVIIVGDEDQLPS
HHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VGPGQVLKDLLNAGIIPTVKLTEIYRQAEGSSVVQLAHAIKNGTLPPDVTKNKQDRSFIA
CCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
CTGNQIVDVVKRVCESAKVKGFSAKDVQVLAPMYRGSAGINVLNEALQQVFNPKQEKSKE
ECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCC
IAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIISIFYAKENVEQQDMVVVSFDGIEVTY
CCHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEE
TKADLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKFLIICGE
EHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
EEAFRSGVNRLDDAMRQTTLGSRLQEAKGEAQMVVINGEEMDVENISPYDFM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]