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The map label for this gene is ycdC [H]

Identifier: 152976770

GI number: 152976770

Start: 3110818

End: 3112308

Strand: Reverse

Name: ycdC [H]

Synonym: Bcer98_3066

Alternate gene names: 152976770

Gene position: 3112308-3110818 (Counterclockwise)

Preceding gene: 152976771

Following gene: 152976769

Centisome position: 76.15

GC content: 36.22

Gene sequence:

>1491_bases
ATGGGAGAGGATATGATGAATGCAAACGATCAAAAAAGAAAAGAGCAAGTTGCGCATATTATTGAAATTCCAGATGAATA
TGTGCTTGTTGTAGATGATAAAAAAATGAATGAAGAGGTACATCTTCTTTGGTGGGAGAAATGTGGTAAACCAGAGGAAA
GCATTCAAGTATGTTTGCGGAAAGAGGATGGAGAATTATTAGAATTATCTATTTGTAAAGAAACAATGCAAAAACAAAAC
GGAATTGCTGAATCAAAAGCGAAGGAAATTGCAGATGCATTTATAAAAAAACATGCACCTTATATACATGGAGAGTGTAA
CTTTATATATGTAACTTCAAAAAAAGAGTGTATTGCCGTTGAATATAAACAAGAAGTACATGGATGCCCTTTACCTCGAA
CGGGTTGCGTAGTGGAAATAGATCTACTCGGAAATATTATTACATTTAGAAACAAAGGAATAAAAGAAAGACCAACTTGG
CCAAGTTCCATTATTAAGAAGGAGGTTATTTTAGACAAATTGCGAAAAAAACAGGAAGTGGAACTTGTTTTTGTACATCT
TTCTAACGGATGGCTTACATATGAAAATCGCGAAATGAAGGATGGATACAATCTTGTATATGAGCCGATTACAGCACATG
CTTTTATAAATCCGTGCACAGGAGCAGACTTACATGATAGGAGTCATTATATAATTGAAACAGCCTCATTGCCATCTTTG
AAAGAAAAAGTGGAAATGGCAACCGACGTTTATCAACTACTGCATATAGATACGACAAAAATGAAAAAAGTACATGAAAA
GTCAGAAGGAAGAGAATTGACAAGCGTTTGGACAAAGGTGTCAACGGAAGAAAAGCATCGAAAAGATAACGATAAATCTT
TTGATACATATTGTAGACAACACATTCCTATCTTGCAGTATGAAGAGGCAACGACTATAACAATTGATCAAGAGACAAAT
CAATTGCTTACATACTGTAAGTGGGGAAAGACTGCGTGCGAAGAACCAATATTAACACGTAAGCAATGTTTGGAAAAAGC
ATTGCAATTTTTAGGGAAAGTGTTTCCACATTTTGAAGAACATCTTCGCATTTGGAAGAACCAAGAGGATGATGAGGATC
TAGGGCATTTTAATTTTTATGTGTACGTGAATGGGATTCGTATTGAAGGTGAGATGGTGAGCGTTGTTATTGATGCATCA
TCAGGAGAAGTAGACATGTATCGTGGCGTATCGCAACAGGTAATTGAACAGCTACTCAGTTATGACACAAATGTAAAAGT
AAATCAAGAAACAGCATTAGATACGTACTGTCAGGCGCTTCATGTATGGTTGAAGTGGTTTGAAGAATGTGAGACCAATC
CGCCTCAGTATCAGCTTGTCTATGTGCCAACGACTGGGAACATAAGTGAGGGATATGGTGCAGATTATGAAAATAGAAAA
GAAATTCGCTATATTGACGCCCATACAGGAGAAAAGATTTGGAGTAAGTAA

Upstream 100 bases:

>100_bases
CATTGCATCGTGAAACGAAGTAAGGCAGCTAGAAATATCTAGCTGTTTTTTTATAGATGTCCATTCCATTTTATGGAATA
ATAAAAAGGATAGACAGAGG

Downstream 100 bases:

>100_bases
GTTTGCCAAAAAGTCCATTGAGGACTCTCGATGGACTTTTTAATACCTCTCTCAAATAGTAAGTGAATTGGTTTTAATGA
AATTTAAGTATTCCTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MGEDMMNANDQKRKEQVAHIIEIPDEYVLVVDDKKMNEEVHLLWWEKCGKPEESIQVCLRKEDGELLELSICKETMQKQN
GIAESKAKEIADAFIKKHAPYIHGECNFIYVTSKKECIAVEYKQEVHGCPLPRTGCVVEIDLLGNIITFRNKGIKERPTW
PSSIIKKEVILDKLRKKQEVELVFVHLSNGWLTYENREMKDGYNLVYEPITAHAFINPCTGADLHDRSHYIIETASLPSL
KEKVEMATDVYQLLHIDTTKMKKVHEKSEGRELTSVWTKVSTEEKHRKDNDKSFDTYCRQHIPILQYEEATTITIDQETN
QLLTYCKWGKTACEEPILTRKQCLEKALQFLGKVFPHFEEHLRIWKNQEDDEDLGHFNFYVYVNGIRIEGEMVSVVIDAS
SGEVDMYRGVSQQVIEQLLSYDTNVKVNQETALDTYCQALHVWLKWFEECETNPPQYQLVYVPTTGNISEGYGADYENRK
EIRYIDAHTGEKIWSK

Sequences:

>Translated_496_residues
MGEDMMNANDQKRKEQVAHIIEIPDEYVLVVDDKKMNEEVHLLWWEKCGKPEESIQVCLRKEDGELLELSICKETMQKQN
GIAESKAKEIADAFIKKHAPYIHGECNFIYVTSKKECIAVEYKQEVHGCPLPRTGCVVEIDLLGNIITFRNKGIKERPTW
PSSIIKKEVILDKLRKKQEVELVFVHLSNGWLTYENREMKDGYNLVYEPITAHAFINPCTGADLHDRSHYIIETASLPSL
KEKVEMATDVYQLLHIDTTKMKKVHEKSEGRELTSVWTKVSTEEKHRKDNDKSFDTYCRQHIPILQYEEATTITIDQETN
QLLTYCKWGKTACEEPILTRKQCLEKALQFLGKVFPHFEEHLRIWKNQEDDEDLGHFNFYVYVNGIRIEGEMVSVVIDAS
SGEVDMYRGVSQQVIEQLLSYDTNVKVNQETALDTYCQALHVWLKWFEECETNPPQYQLVYVPTTGNISEGYGADYENRK
EIRYIDAHTGEKIWSK
>Mature_495_residues
GEDMMNANDQKRKEQVAHIIEIPDEYVLVVDDKKMNEEVHLLWWEKCGKPEESIQVCLRKEDGELLELSICKETMQKQNG
IAESKAKEIADAFIKKHAPYIHGECNFIYVTSKKECIAVEYKQEVHGCPLPRTGCVVEIDLLGNIITFRNKGIKERPTWP
SSIIKKEVILDKLRKKQEVELVFVHLSNGWLTYENREMKDGYNLVYEPITAHAFINPCTGADLHDRSHYIIETASLPSLK
EKVEMATDVYQLLHIDTTKMKKVHEKSEGRELTSVWTKVSTEEKHRKDNDKSFDTYCRQHIPILQYEEATTITIDQETNQ
LLTYCKWGKTACEEPILTRKQCLEKALQFLGKVFPHFEEHLRIWKNQEDDEDLGHFNFYVYVNGIRIEGEMVSVVIDASS
GEVDMYRGVSQQVIEQLLSYDTNVKVNQETALDTYCQALHVWLKWFEECETNPPQYQLVYVPTTGNISEGYGADYENRKE
IRYIDAHTGEKIWSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycdB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57687; Mature: 57556

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEDMMNANDQKRKEQVAHIIEIPDEYVLVVDDKKMNEEVHLLWWEKCGKPEESIQVCLR
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHC
KEDGELLELSICKETMQKQNGIAESKAKEIADAFIKKHAPYIHGECNFIYVTSKKECIAV
CCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCEEEE
EYKQEVHGCPLPRTGCVVEIDLLGNIITFRNKGIKERPTWPSSIIKKEVILDKLRKKQEV
EEHHHHCCCCCCCCCCEEEEHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
ELVFVHLSNGWLTYENREMKDGYNLVYEPITAHAFINPCTGADLHDRSHYIIETASLPSL
EEEEEEECCCEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCHH
KEKVEMATDVYQLLHIDTTKMKKVHEKSEGRELTSVWTKVSTEEKHRKDNDKSFDTYCRQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHH
HIPILQYEEATTITIDQETNQLLTYCKWGKTACEEPILTRKQCLEKALQFLGKVFPHFEE
CCCEEEECCCEEEEEECCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLRIWKNQEDDEDLGHFNFYVYVNGIRIEGEMVSVVIDASSGEVDMYRGVSQQVIEQLLS
HHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHCCCHHHHHHHHHC
YDTNVKVNQETALDTYCQALHVWLKWFEECETNPPQYQLVYVPTTGNISEGYGADYENRK
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
EIRYIDAHTGEKIWSK
EEEEEECCCCCHHHCC
>Mature Secondary Structure 
GEDMMNANDQKRKEQVAHIIEIPDEYVLVVDDKKMNEEVHLLWWEKCGKPEESIQVCLR
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHC
KEDGELLELSICKETMQKQNGIAESKAKEIADAFIKKHAPYIHGECNFIYVTSKKECIAV
CCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCEEEE
EYKQEVHGCPLPRTGCVVEIDLLGNIITFRNKGIKERPTWPSSIIKKEVILDKLRKKQEV
EEHHHHCCCCCCCCCCEEEEHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
ELVFVHLSNGWLTYENREMKDGYNLVYEPITAHAFINPCTGADLHDRSHYIIETASLPSL
EEEEEEECCCEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCHH
KEKVEMATDVYQLLHIDTTKMKKVHEKSEGRELTSVWTKVSTEEKHRKDNDKSFDTYCRQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHH
HIPILQYEEATTITIDQETNQLLTYCKWGKTACEEPILTRKQCLEKALQFLGKVFPHFEE
CCCEEEECCCEEEEEECCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLRIWKNQEDDEDLGHFNFYVYVNGIRIEGEMVSVVIDASSGEVDMYRGVSQQVIEQLLS
HHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHCCCHHHHHHHHHC
YDTNVKVNQETALDTYCQALHVWLKWFEECETNPPQYQLVYVPTTGNISEGYGADYENRK
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
EIRYIDAHTGEKIWSK
EEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]