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The map label for this gene is dppC [H]

Identifier: 152974033

GI number: 152974033

Start: 198121

End: 199125

Strand: Direct

Name: dppC [H]

Synonym: Bcer98_0187

Alternate gene names: 152974033

Gene position: 198121-199125 (Clockwise)

Preceding gene: 152974032

Following gene: 152974034

Centisome position: 4.85

GC content: 37.31

Gene sequence:

>1005_bases
ATGGGGGCTTACGAAATCGATGATCAGCTATTGACGGCTGAAGATAAGAAAGCATTAACTGCTAATAAAGAACAGCAAAT
GATTAGTCGGAAAAAGGAAGTATTTCAAAAACTCATATCAAACCCAATAGCAATTATAGGGGGAGTCACTTTACTTTTAA
TCGTTATTTTTTCTCTTATCGGAGAAAGTTTAACGCCATATAGTGCAAATGAGCAAATAAAAGAAGCAACAAACCTCCAA
CCAAGTAGTGAGCATTGGTTCGGTACAGATGATTTAGGAAGAGATATTTGGGCACGAACATGGGCTGGTGGAAAAATTTC
ATTAGCAGTCGGATTGATCGCAGCAGCTCTTGATATCGGATTAGGTGTACTGATTGGTGGCTTTAGTGGATATGTGAGAG
GGCGTAATCGTCTCGGTACGTTAATTGATGAGTGGATTGTAAGAGGAATCGAAGTGATGTATGGTATACCATATTTATTA
ATTGTTATTTTACTATTAATTGTTATGAAGCCAGGACTGTTTACAATTATTCTTTCTCTTGCATTAACAGGTTGGATTGG
AATGGCACGACTTGTACGAGCGCAAGTGCTTTCATTAAAACAAAAAGAATTTGTCATTGCCGCTGAGAGATTAGGAACAT
CTCATATGAAAATTATTTATAAACACCTAATTCCGAATTTAACAGGGATTATTATTGTGAATTTATCTTTTACGATTCCA
GCTGCCATTTTCTCAGAATCATTTTTAAGTTTTATCGGATTGGGTGTACAATCGCCAGCAGCAAGTTGGGGAACGATGAC
AAACGATGCACTAGGAACATTGTTAAGTGGGGAATGGTGGCAGCTTTTTTTCCCAGCGATAATGATTGCATTAATTATGT
TTGCTTTTAATGCGATTGGAGATGGTTTGCAGGATGCAATTGATCCAAAAATTGTGAAACAAAATCGAAAGGGGAAAAAA
CATGGGGCAGCTCTTATCTTTAGAAAACGTAACGTTAGCCGTTGA

Upstream 100 bases:

>100_bases
TCTATAGTGCACTGCTCATTATATGTATTTTCGTTACGGATATCATTCATCGCATGATTGATCCGCGCATTCGTTCTATT
ACGTGAGGAGGGAAATTGAA

Downstream 100 bases:

>100_bases
AAAAGAGGCTCGTAAACAACCGATTGTAAAACATGTTTCTTTTTCCATTCATGAAGGTGAAATAGTTGCACTTGTGGGAG
AAAGTGGTTCGGGAAAAAGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGAYEIDDQLLTAEDKKALTANKEQQMISRKKEVFQKLISNPIAIIGGVTLLLIVIFSLIGESLTPYSANEQIKEATNLQ
PSSEHWFGTDDLGRDIWARTWAGGKISLAVGLIAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEVMYGIPYLL
IVILLLIVMKPGLFTIILSLALTGWIGMARLVRAQVLSLKQKEFVIAAERLGTSHMKIIYKHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKQNRKGKK
HGAALIFRKRNVSR

Sequences:

>Translated_334_residues
MGAYEIDDQLLTAEDKKALTANKEQQMISRKKEVFQKLISNPIAIIGGVTLLLIVIFSLIGESLTPYSANEQIKEATNLQ
PSSEHWFGTDDLGRDIWARTWAGGKISLAVGLIAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEVMYGIPYLL
IVILLLIVMKPGLFTIILSLALTGWIGMARLVRAQVLSLKQKEFVIAAERLGTSHMKIIYKHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKQNRKGKK
HGAALIFRKRNVSR
>Mature_333_residues
GAYEIDDQLLTAEDKKALTANKEQQMISRKKEVFQKLISNPIAIIGGVTLLLIVIFSLIGESLTPYSANEQIKEATNLQP
SSEHWFGTDDLGRDIWARTWAGGKISLAVGLIAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEVMYGIPYLLI
VILLLIVMKPGLFTIILSLALTGWIGMARLVRAQVLSLKQKEFVIAAERLGTSHMKIIYKHLIPNLTGIIIVNLSFTIPA
AIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKQNRKGKKH
GAALIFRKRNVSR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=297, Percent_Identity=34.006734006734, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1787498, Length=306, Percent_Identity=34.640522875817, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=32.2259136212625, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=250, Percent_Identity=32.8, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789964, Length=266, Percent_Identity=34.2105263157895, Blast_Score=131, Evalue=8e-32,
Organism=Escherichia coli, GI1788505, Length=233, Percent_Identity=31.7596566523605, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787549, Length=292, Percent_Identity=26.027397260274, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36620; Mature: 36489

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYEIDDQLLTAEDKKALTANKEQQMISRKKEVFQKLISNPIAIIGGVTLLLIVIFSLI
CCCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GESLTPYSANEQIKEATNLQPSSEHWFGTDDLGRDIWARTWAGGKISLAVGLIAAALDIG
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEVMYGIPYLLIVILLLIVMKPGLFTIILSL
HHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLVRAQVLSLKQKEFVIAAERLGTSHMKIIYKHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKQNRKGKKHGAALIFRKRNVSR
CHHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
GAYEIDDQLLTAEDKKALTANKEQQMISRKKEVFQKLISNPIAIIGGVTLLLIVIFSLI
CCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GESLTPYSANEQIKEATNLQPSSEHWFGTDDLGRDIWARTWAGGKISLAVGLIAAALDIG
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEVMYGIPYLLIVILLLIVMKPGLFTIILSL
HHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLVRAQVLSLKQKEFVIAAERLGTSHMKIIYKHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKQNRKGKKHGAALIFRKRNVSR
CHHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]