Click here to switch to the map view.

The map label for this gene is yacP [H]

Identifier: 152973940

GI number: 152973940

Start: 108735

End: 109247

Strand: Direct

Name: yacP [H]

Synonym: Bcer98_0087

Alternate gene names: 152973940

Gene position: 108735-109247 (Clockwise)

Preceding gene: 152973939

Following gene: 152973941

Centisome position: 2.66

GC content: 38.79

Gene sequence:

>513_bases
ATGAATGATATTTTAATCGTTGATGGCTACAACATCATAGGGGCTTGGAAAGACTTGAAGAAATTGAGGGATGTAGATTT
ACAAGCATCGAGGGACGCATTAATTGATAAAATGGCAGATTATCAAGGGTACACTGGAACAAAAGTAATGATTGTGTTTG
ATGCTTATACAGTTCAAGGTATTGAGAAAAAGATGAAGCAATCGCGTGTTGAGGTTATTTTTACTAGAAAAAATCAAACT
GCTGATGAAAAGATCGAACAGTTGGCAAGCGAACTTCGTAATATTAATACACAAATCTATGTTGCAACTTCTGATTATAC
GGAGCAATGGGTTATCTTTGGACAGGGGGCGCTTAGAAAGTCAGCGCGTGAACTGGAGTTAGAAGTGCAGGCGATGGAAC
AACAGGTGCGTCATGAAACGAAAGCGACCAAAGAGAAACAACCAGCTATGCGAACAATATTTAGCAAGGATGTTACAGAA
AAATTAGAAAAATTAAGGCGAGGAGAGCGTTGA

Upstream 100 bases:

>100_bases
ACCCATGGTCGGTAAAGTTACATCCTTAAATGCTTCAGTAGCTGCAAGTCTGTTAATGTATGAGGTATATCGTAAACGCC
ACCAGATTGGTAAGTAACAA

Downstream 100 bases:

>100_bases
GACATTGACGCTCTTTAAACGCTTACTGTATAATATTTCTAAATAAATAGCGGTCGGAGGGATCAGAGTGGAAACAGGCT
TCGTAAGTACTAGCAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNDILIVDGYNIIGAWKDLKKLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQGIEKKMKQSRVEVIFTRKNQT
ADEKIEQLASELRNINTQIYVATSDYTEQWVIFGQGALRKSARELELEVQAMEQQVRHETKATKEKQPAMRTIFSKDVTE
KLEKLRRGER

Sequences:

>Translated_170_residues
MNDILIVDGYNIIGAWKDLKKLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQGIEKKMKQSRVEVIFTRKNQT
ADEKIEQLASELRNINTQIYVATSDYTEQWVIFGQGALRKSARELELEVQAMEQQVRHETKATKEKQPAMRTIFSKDVTE
KLEKLRRGER
>Mature_170_residues
MNDILIVDGYNIIGAWKDLKKLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQGIEKKMKQSRVEVIFTRKNQT
ADEKIEQLASELRNINTQIYVATSDYTEQWVIFGQGALRKSARELELEVQAMEQQVRHETKATKEKQPAMRTIFSKDVTE
KLEKLRRGER

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19722; Mature: 19722

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDILIVDGYNIIGAWKDLKKLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQG
CCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHH
IEKKMKQSRVEVIFTRKNQTADEKIEQLASELRNINTQIYVATSDYTEQWVIFGQGALRK
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHH
SARELELEVQAMEQQVRHETKATKEKQPAMRTIFSKDVTEKLEKLRRGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDILIVDGYNIIGAWKDLKKLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQG
CCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHH
IEKKMKQSRVEVIFTRKNQTADEKIEQLASELRNINTQIYVATSDYTEQWVIFGQGALRK
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHH
SARELELEVQAMEQQVRHETKATKEKQPAMRTIFSKDVTEKLEKLRRGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]