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The map label for this gene is yacO [H]

Identifier: 152973939

GI number: 152973939

Start: 107988

End: 108731

Strand: Direct

Name: yacO [H]

Synonym: Bcer98_0086

Alternate gene names: 152973939

Gene position: 107988-108731 (Clockwise)

Preceding gene: 152973938

Following gene: 152973940

Centisome position: 2.64

GC content: 39.52

Gene sequence:

>744_bases
ATGAGTAGCGAATACATTATTGGACGTAATCCCGTTATTGAAGCATTGCGATCGGGACGAGATATTAATAAGATTTGGGT
GGCAGAAGGTGCTGCTAAAGGACAAATTCAAATTGTCGTAGCATTAGCAAAAGAGAATAAAATTCTTCTGCAATATGCCC
CAAAGAAAAAATTAGACCAACTTGTTGAAGGAAATCATCAAGGAGTAATTGCTCAAGTAGCAGCATATCAATATGCGGAA
TTAGAAGATTTATTCAAAGTTGCTGCTAAACGTAATGAAGAGCCATTCTTTTTAATTTTAGATGAGATTGAAGATCCACA
TAATCTGGGGTCTATTATGCGTACCGCAGATGCAACTGGAGCGCACGGTATTATTATTCCAAAGCGACGATCTGTTGGAC
TGACAGCTTCAGTTGCAAAGGCCTCTACAGGAGCGATTGAGTATATTCCTGTTGTGCGAGTGACAAATTTATCTCGTACA
ATCGATGAGCTAAAGGAACGCGGTCTATGGATCGCTGGTACAGATGCTAAAGGGAAGACTGATTATCGTAATCTAGATGG
TAATATGCCGATTGGATTAGTAATTGGTAGTGAAGGAAAAGGCATGAGCCGTATCATTGGACAAAAGTGTGATTTCCTAG
TTCATTTACCCATGGTCGGTAAAGTTACATCCTTAAATGCTTCAGTAGCTGCAAGTCTGTTAATGTATGAGGTATATCGT
AAACGCCACCAGATTGGTAAGTAA

Upstream 100 bases:

>100_bases
TGATTGGTTATCATTATTTACTACACAATCGTGAAAGATTAGAGGAAATTGTAAATAAGGCGATTCATGTGTTAGAAGGA
ACGGAAGGAGGCAAATTGTC

Downstream 100 bases:

>100_bases
CAAATGAATGATATTTTAATCGTTGATGGCTACAACATCATAGGGGCTTGGAAAGACTTGAAGAAATTGAGGGATGTAGA
TTTACAAGCATCGAGGGACG

Product: RNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSSEYIIGRNPVIEALRSGRDINKIWVAEGAAKGQIQIVVALAKENKILLQYAPKKKLDQLVEGNHQGVIAQVAAYQYAE
LEDLFKVAAKRNEEPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRSVGLTASVAKASTGAIEYIPVVRVTNLSRT
IDELKERGLWIAGTDAKGKTDYRNLDGNMPIGLVIGSEGKGMSRIIGQKCDFLVHLPMVGKVTSLNASVAASLLMYEVYR
KRHQIGK

Sequences:

>Translated_247_residues
MSSEYIIGRNPVIEALRSGRDINKIWVAEGAAKGQIQIVVALAKENKILLQYAPKKKLDQLVEGNHQGVIAQVAAYQYAE
LEDLFKVAAKRNEEPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRSVGLTASVAKASTGAIEYIPVVRVTNLSRT
IDELKERGLWIAGTDAKGKTDYRNLDGNMPIGLVIGSEGKGMSRIIGQKCDFLVHLPMVGKVTSLNASVAASLLMYEVYR
KRHQIGK
>Mature_246_residues
SSEYIIGRNPVIEALRSGRDINKIWVAEGAAKGQIQIVVALAKENKILLQYAPKKKLDQLVEGNHQGVIAQVAAYQYAEL
EDLFKVAAKRNEEPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRSVGLTASVAKASTGAIEYIPVVRVTNLSRTI
DELKERGLWIAGTDAKGKTDYRNLDGNMPIGLVIGSEGKGMSRIIGQKCDFLVHLPMVGKVTSLNASVAASLLMYEVYRK
RHQIGK

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI40068479, Length=258, Percent_Identity=26.7441860465116, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI1790623, Length=247, Percent_Identity=38.0566801619433, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1790083, Length=159, Percent_Identity=29.559748427673, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17555908, Length=258, Percent_Identity=29.4573643410853, Blast_Score=97, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6324775, Length=165, Percent_Identity=33.9393939393939, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004441
- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27049; Mature: 26918

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEYIIGRNPVIEALRSGRDINKIWVAEGAAKGQIQIVVALAKENKILLQYAPKKKLDQ
CCCCEEECCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHH
LVEGNHQGVIAQVAAYQYAELEDLFKVAAKRNEEPFFLILDEIEDPHNLGSIMRTADATG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC
AHGIIIPKRRSVGLTASVAKASTGAIEYIPVVRVTNLSRTIDELKERGLWIAGTDAKGKT
CCEEEEECCCCCCCEEEHHHCCCCCEEEEEEEEECCHHHHHHHHHHCCCEEEECCCCCCC
DYRNLDGNMPIGLVIGSEGKGMSRIIGQKCDFLVHLPMVGKVTSLNASVAASLLMYEVYR
CCCCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHH
KRHQIGK
HHHCCCC
>Mature Secondary Structure 
SSEYIIGRNPVIEALRSGRDINKIWVAEGAAKGQIQIVVALAKENKILLQYAPKKKLDQ
CCCEEECCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHH
LVEGNHQGVIAQVAAYQYAELEDLFKVAAKRNEEPFFLILDEIEDPHNLGSIMRTADATG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC
AHGIIIPKRRSVGLTASVAKASTGAIEYIPVVRVTNLSRTIDELKERGLWIAGTDAKGKT
CCEEEEECCCCCCCEEEHHHCCCCCEEEEEEEEECCHHHHHHHHHHCCCEEEECCCCCCC
DYRNLDGNMPIGLVIGSEGKGMSRIIGQKCDFLVHLPMVGKVTSLNASVAASLLMYEVYR
CCCCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHH
KRHQIGK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287; 3145906 [H]