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The map label for this gene is betA

Identifier: 152969599

GI number: 152969599

Start: 1193309

End: 1193743

Strand: Direct

Name: betA

Synonym: KPN_01043

Alternate gene names: NA

Gene position: 1193309-1193743 (Clockwise)

Preceding gene: 152969598

Following gene: 152969601

Centisome position: 22.45

GC content: 62.99

Gene sequence:

>435_bases
ATGACGTTCAGACAGGGTGCAATGGCGCTGGTGCTGGCAGGGTTACTCAGCGGCTGCGTGGCGGGTGGAAGTTCATCGAC
CAGCGCGCCGAAGCCCGGCGTCTGCCCGGCGGATAAGTCCATGGTGCAAACCACGCTTTACTTCGGTCTGAGCCGCCCGG
CGGGGAAAGACATCACCGCTGAAGAGTGGCAACAGTTTGTCGACCGTGACGTCACGCCGCGCTTTCGCGACGGGCTGACG
GTGTTTGATGCCCACGGCCAGTGGCTTGGCCAGAATGGTCAGGTGGTGCGGGAGCAGAGCAAGGCGCTGATGGTGATCCA
TGGGCATGACGCGCAGAGCGAGGCCGGTATTGAGGCTCTGCGCCAGGGCTATAAATCACGCTTCGCGCAGGAGTCGGTGA
TGCGTGTCGACCAGCCGGTCTGCGTGCAGTTCTGA

Upstream 100 bases:

>100_bases
GCTTTTTATTGCCTGGTGCCGTGCCGGAATATTATAACCCTTGCTAATTATCTGAAAATCCGCTGATATTTCCTGACTAA
TAACAATGAGGATAGCAAAG

Downstream 100 bases:

>100_bases
GTAAACGGCGGGGGCAGCCCCGCCGTTTGTTTTACAGCACCAGCCCGGCGAAGCTGGCGGAAAGCAGGCTTACCAGCGTG
GCGCTATACACCAGCCGCAG

Product: choline dehydrogenase

Products: NA

Alternate protein names: Choline Dehydrogenase; Conserved Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTFRQGAMALVLAGLLSGCVAGGSSSTSAPKPGVCPADKSMVQTTLYFGLSRPAGKDITAEEWQQFVDRDVTPRFRDGLT
VFDAHGQWLGQNGQVVREQSKALMVIHGHDAQSEAGIEALRQGYKSRFAQESVMRVDQPVCVQF

Sequences:

>Translated_144_residues
MTFRQGAMALVLAGLLSGCVAGGSSSTSAPKPGVCPADKSMVQTTLYFGLSRPAGKDITAEEWQQFVDRDVTPRFRDGLT
VFDAHGQWLGQNGQVVREQSKALMVIHGHDAQSEAGIEALRQGYKSRFAQESVMRVDQPVCVQF
>Mature_143_residues
TFRQGAMALVLAGLLSGCVAGGSSSTSAPKPGVCPADKSMVQTTLYFGLSRPAGKDITAEEWQQFVDRDVTPRFRDGLTV
FDAHGQWLGQNGQVVREQSKALMVIHGHDAQSEAGIEALRQGYKSRFAQESVMRVDQPVCVQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15604; Mature: 15473

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRQGAMALVLAGLLSGCVAGGSSSTSAPKPGVCPADKSMVQTTLYFGLSRPAGKDITA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH
EEWQQFVDRDVTPRFRDGLTVFDAHGQWLGQNGQVVREQSKALMVIHGHDAQSEAGIEAL
HHHHHHHCCCCCCHHHCCCEEEECCCCEECCCCCEEECCCCEEEEEECCCCCCHHHHHHH
RQGYKSRFAQESVMRVDQPVCVQF
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TFRQGAMALVLAGLLSGCVAGGSSSTSAPKPGVCPADKSMVQTTLYFGLSRPAGKDITA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH
EEWQQFVDRDVTPRFRDGLTVFDAHGQWLGQNGQVVREQSKALMVIHGHDAQSEAGIEAL
HHHHHHHCCCCCCHHHCCCEEEECCCCEECCCCCEEECCCCEEEEEECCCCCCHHHHHHH
RQGYKSRFAQESVMRVDQPVCVQF
HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA