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The map label for this gene is ompX [H]

Identifier: 152969400

GI number: 152969400

Start: 939222

End: 939734

Strand: Direct

Name: ompX [H]

Synonym: KPN_00843

Alternate gene names: 152969400

Gene position: 939222-939734 (Clockwise)

Preceding gene: 152969393

Following gene: 152969402

Centisome position: 17.67

GC content: 51.27

Gene sequence:

>513_bases
ATGAATAAAATTGCACGTCTTTCAGCACTGGCCGTTGTTCTGGCTGCATCCGTAGGTACCACTGCATTTGCTGCAACTTC
TACCGTAACCGGCGGTTACGCGCAGAGCGACATGCAGGGTAAAGCGAACAAAGCTGGCGGTTTCAACCTGAAATACCGTT
ACGAGCAAGATAACAACCCGCTGGGCGTTATCGGTTCCTTCACCTACACCGAGAAGGATAACAACAGCAACGGTACTTAC
AACAAAGGTCAGTACTACGGCATCACCGCTGGTCCGGCTTACCGTCTGAACGACTGGGCAAGCATCTACGGCGTAGTGGG
TGTTGGTTACGGTAAATTCCAGAACAACAACTACCCTCATAAATCCGATATGAGCGACTACGGTTTCTCCTACGGTGCTG
GTCTGCAGTTCAACCCGATCGAAAACGTTGCTCTGGACTTCTCCTACGAGCAGTCTCGTATTCGTAACGTTGACGTCGGC
ACCTGGATTGCTGGCGTGGGTTACCGCTTCTAA

Upstream 100 bases:

>100_bases
ATGAAAAAGTATGTTAGACAATGTAAACTCCAAAGAGTTTCCCAAAAGTTTTTGATATATTTAAGGCTTAGGACTTATTA
GAAACACATTTGAGGTGGTT

Downstream 100 bases:

>100_bases
TCACTCCGGTGATATGAAAAATCCGCCTCTCGGGGCGGATTTTTTTTGCCTGCTGACGGCCGGCCCGGGCGACTGGCCGG
GCCGGCGCGATTAATTGACT

Product: outer membrane protein X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTY
NKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVG
TWIAGVGYRF

Sequences:

>Translated_170_residues
MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTY
NKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVG
TWIAGVGYRF
>Mature_170_residues
MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTY
NKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVG
TWIAGVGYRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=172, Percent_Identity=81.3953488372093, Blast_Score=275, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 18464; Mature: 18464

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00694 ENT_VIR_OMP_1 ; PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNP
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
LGVIGSFTYTEKDNNSNGTYNKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPH
EEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEECCCHHHEEEEEECCCEECCCCCCCC
KSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVGTWIAGVGYRF
CCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHCCCCCCCEEECCCCCC
>Mature Secondary Structure
MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNP
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
LGVIGSFTYTEKDNNSNGTYNKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPH
EEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEECCCHHHEEEEEECCCEECCCCCCCC
KSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVGTWIAGVGYRF
CCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]