Definition | Staphylococcus aureus subsp. aureus str. Newman chromosome, complete genome. |
---|---|
Accession | NC_009641 |
Length | 2,878,897 |
Click here to switch to the map view.
The map label for this gene is mazF [H]
Identifier: 151222186
GI number: 151222186
Start: 2192598
End: 2192960
Strand: Reverse
Name: mazF [H]
Synonym: NWMN_1974
Alternate gene names: 151222186
Gene position: 2192960-2192598 (Counterclockwise)
Preceding gene: 151222187
Following gene: 151222185
Centisome position: 76.17
GC content: 33.33
Gene sequence:
>363_bases ATGATTAGACGAGGAGATGTTTATTTAGCAGATTTATCACCAGTACAGGGATCTGAACAAGGGGGAGTCAGACCTGTAGT CATAATTCAAAATGATACTGGTAATAAATATAGTCCTACAGTTATTGTTGCGGCAATAACTGGTAGGATTAATAAAGCGA AAATACCGACACATGTAGAGATTGAAAAGAAAAAGTATAAGTTGGATAAAGACTCAGTTATATTATTAGAACAAATTCGT ACACTTGATAAAAAACGATTGAAAGAAAAACTGACGTACTTATCCGATGATAAAATGAAAGAAGTAGATAATGCACTAAT GATTAGTTTAGGGCTGAATGCAGTAGCTCACCAGAAAAATTAG
Upstream 100 bases:
>100_bases TGGCTGATTTAAATCTCTCCCTAGCGAACGAAGCTTTTCCGATAGAGTGTGAAGCATGCGATTGCAACGAAACATATTTA TCTTCTAATTCAACGAATGA
Downstream 100 bases:
>100_bases GCGTCTATTATATGTATTTTTCAGAGATAAATAAAATATTGATATAAAAGACAATAACTTTATAATAATTATAACTATTT CTAAATTCTGTACGAAGAAT
Product: PemK family DNA-binding protein
Products: NA
Alternate protein names: Endoribonuclease MazF; Toxin MazF [H]
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
Sequences:
>Translated_120_residues MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN >Mature_120_residues MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
Specific function: Part of a toxin-antitoxin (TA) module. Ribosome- independent, sequence-specific endoribonuclease that cleaves mRNA, thus inhibiting protein synthesis and inducing bacterial stasis. Cleavages occur preferentially in a U-rich region with a consensus sequenc
COG id: COG2337
COG function: function code T; Growth inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PemK/MazF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003477 - InterPro: IPR011067 [H]
Pfam domain/function: PF02452 PemK [H]
EC number: NA
Molecular weight: Translated: 13442; Mature: 13442
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE CCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEE IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN EEHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCEEECCCC >Mature Secondary Structure MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE CCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEE IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN EEHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA