Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is rpl32e [H]
Identifier: 150401823
GI number: 150401823
Start: 1457620
End: 1458087
Strand: Direct
Name: rpl32e [H]
Synonym: Maeo_1401
Alternate gene names: 150401823
Gene position: 1457620-1458087 (Clockwise)
Preceding gene: 150401822
Following gene: 150401824
Centisome position: 92.87
GC content: 33.55
Gene sequence:
>468_bases ATGAGTAAAAAGAGATTAATGAGATTAAAACTCAAAATGAAACAGAAAAAACCTGATTTCAAGAGACAGGAATGGTTCAA ATGTAAAAGAATCGGAACAAGTTGGAGACGAACAAAAGGTCTTCACAGTAGTATGAGGAAACAATTGACCCATAGGTCTG CTATTGTTAAAATTGGATACAGAAGTCCTGTTGAAGTTAGAGGATTACATCCATCAGGTTTGGAAGACATAATTATACAC AATGTAAAGGAATTAGAAGCATTAAACCCTGAAATTCAAGGGGCAAGAGTAGCTTCAACTGTTGGTAAAAGGAAAAAAAT AGACATAATAAAGAGAGCAGAAGAATTGGGAATCAAAATATTCAATATATCCAAAAAGAAACAGGATGAATTATTGAATC CTAAGGCAGAGGAAGTAGCGGAAAATCCTGAAACCGAAACAGAAGAAACAGAAACAGAAGAAAATTAA
Upstream 100 bases:
>100_bases CGTTCGTAGATTTGCTACAAATAATATGTGTAAATTAAAGATAAATAATAAATATATAATAAATCTTTGATTTGCCTAGT ATCGAAAAAACGGTGGTCTC
Downstream 100 bases:
>100_bases TAATAAAATATTATTATTCTTATAGGTGGTATAATGGATATATCAACCCAAAGAAGAATTGCATCCGATGTATTGGATTG CGGTATTGATAGGGTATGGA
Product: 50S ribosomal protein L32e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSKKRLMRLKLKMKQKKPDFKRQEWFKCKRIGTSWRRTKGLHSSMRKQLTHRSAIVKIGYRSPVEVRGLHPSGLEDIIIH NVKELEALNPEIQGARVASTVGKRKKIDIIKRAEELGIKIFNISKKKQDELLNPKAEEVAENPETETEETETEEN
Sequences:
>Translated_155_residues MSKKRLMRLKLKMKQKKPDFKRQEWFKCKRIGTSWRRTKGLHSSMRKQLTHRSAIVKIGYRSPVEVRGLHPSGLEDIIIH NVKELEALNPEIQGARVASTVGKRKKIDIIKRAEELGIKIFNISKKKQDELLNPKAEEVAENPETETEETETEEN >Mature_154_residues SKKRLMRLKLKMKQKKPDFKRQEWFKCKRIGTSWRRTKGLHSSMRKQLTHRSAIVKIGYRSPVEVRGLHPSGLEDIIIHN VKELEALNPEIQGARVASTVGKRKKIDIIKRAEELGIKIFNISKKKQDELLNPKAEEVAENPETETEETETEEN
Specific function: Unknown
COG id: COG1717
COG function: function code J; Ribosomal protein L32E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32e family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319378, Length=112, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001515 - InterPro: IPR018263 - ProDom: PD003823 [H]
Pfam domain/function: PF01655 Ribosomal_L32e [H]
EC number: NA
Molecular weight: Translated: 18041; Mature: 17910
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: PS00580 RIBOSOMAL_L32E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKRLMRLKLKMKQKKPDFKRQEWFKCKRIGTSWRRTKGLHSSMRKQLTHRSAIVKIGY CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC RSPVEVRGLHPSGLEDIIIHNVKELEALNPEIQGARVASTVGKRKKIDIIKRAEELGIKI CCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEE FNISKKKQDELLNPKAEEVAENPETETEETETEEN EECCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKKRLMRLKLKMKQKKPDFKRQEWFKCKRIGTSWRRTKGLHSSMRKQLTHRSAIVKIGY CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC RSPVEVRGLHPSGLEDIIIHNVKELEALNPEIQGARVASTVGKRKKIDIIKRAEELGIKI CCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEE FNISKKKQDELLNPKAEEVAENPETETEETETEEN EECCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA