Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401784

Identifier: 150401784

GI number: 150401784

Start: 1424446

End: 1424760

Strand: Direct

Name: 150401784

Synonym: Maeo_1362

Alternate gene names: NA

Gene position: 1424446-1424760 (Clockwise)

Preceding gene: 150401782

Following gene: 150401786

Centisome position: 90.76

GC content: 26.67

Gene sequence:

>315_bases
ATGGAGCAAAATAAACAAAATAATAACAGTAATATAAATATTGATTTTTGGACATTTTTAGAACAATGCTATAATAATAA
TGTAAAAATAGATTTAGGGCATTTAAAAATTTTAACTGCATTATTGCATTCTAACTCTAATTATGTATCGGGGGAATATT
TAAAAAAATGTATTGATAGAGATAGCAGGGGTGCAGTCCATAAACGGATAAGGGATTTGAAAATATTGGGATTTGAAATA
GTTACAAAATCGGGTAATTTTGGAGGGTATAAACTTATAAAAATTCCCGAATGGTTTAAACTAAGTGGATATTAA

Upstream 100 bases:

>100_bases
AAAATATTAATAATATATATTATATTTATATAAGATGTGTGGAAATATATACTATGATTTCAGAAGGAGATTATTGAATT
TTCTCCCAAAGGTCGAAAAT

Downstream 100 bases:

>100_bases
TAATGGAGTATAATAATTTAAATATATATAATTAAATACAATAAAACAGATAATCAAAAATTAATCAAAAATCTTTTTTA
TATATGGTTCAAATGGAATT

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEQNKQNNNSNINIDFWTFLEQCYNNNVKIDLGHLKILTALLHSNSNYVSGEYLKKCIDRDSRGAVHKRIRDLKILGFEI
VTKSGNFGGYKLIKIPEWFKLSGY

Sequences:

>Translated_104_residues
MEQNKQNNNSNINIDFWTFLEQCYNNNVKIDLGHLKILTALLHSNSNYVSGEYLKKCIDRDSRGAVHKRIRDLKILGFEI
VTKSGNFGGYKLIKIPEWFKLSGY
>Mature_104_residues
MEQNKQNNNSNINIDFWTFLEQCYNNNVKIDLGHLKILTALLHSNSNYVSGEYLKKCIDRDSRGAVHKRIRDLKILGFEI
VTKSGNFGGYKLIKIPEWFKLSGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 12082; Mature: 12082

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNKQNNNSNINIDFWTFLEQCYNNNVKIDLGHLKILTALLHSNSNYVSGEYLKKCIDR
CCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
DSRGAVHKRIRDLKILGFEIVTKSGNFGGYKLIKIPEWFKLSGY
CCCCHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCEEEECCC
>Mature Secondary Structure
MEQNKQNNNSNINIDFWTFLEQCYNNNVKIDLGHLKILTALLHSNSNYVSGEYLKKCIDR
CCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
DSRGAVHKRIRDLKILGFEIVTKSGNFGGYKLIKIPEWFKLSGY
CCCCHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]