Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401725
Identifier: 150401725
GI number: 150401725
Start: 1364526
End: 1365599
Strand: Direct
Name: 150401725
Synonym: Maeo_1303
Alternate gene names: NA
Gene position: 1364526-1365599 (Clockwise)
Preceding gene: 150401724
Following gene: 150401728
Centisome position: 86.94
GC content: 34.17
Gene sequence:
>1074_bases ATGAATTCTTATTTAAATTTGAAAGAGGAAGTTTGGGACAAAGATATTTGTTCGGGTTGTGGTGCATGTGTAGCAGTGTG CCCCGTAGATAATATCTATTTTAAAGAAGATAGCCCTATAAAATTCATATGTGATGAATGTGCATGTATAATCTCCCCTG TTGAAGAAATAGAATACCCAGTTTCTGCTGAATTCTGTAAGACAACTCTTTACGATGTCCCTTGTGGTGCATGTTATGGC GCCTGCCCAAGAACAAAAAATAAAGTTATTCCAACGGTGAAAAACGGAATTGGTAGAGTGCTACAAAGTGTAAAGGCAAA ATCTAAAATAGAAGTAAAAGAAGCCCAAAGTGGAGGCGTAGTTTCTGCCATATTGGCAAGTGCTTTTGATGAAGGATTAA TTGATGGTGCCATTGTAATGATGGAGGACAAATGGACAATGGAACCACAATCCTATTTAGCAACATCAAAAGAGGAAGTT TTAAAATCCGCAGGAAGTAGATATAACTGGAATGTGCCAATACTTAGGGCTTTAAAAGATGCCGTAATGGTTAAAAAGTT AAAGAAAATAGCAATTGTAGGAACTCCATGTGTAATGAATGCAGTGCATCAAATAATGGCATCAGACAATGACCTTTTAA AACCATTTAAAGATACAATAAGGTTAAAAATAGGTTTATTCTGTTTCGAAACCTACAATTATGAAAAAATGATGGAAATA TTTGAAAAAAATAATATAAATCCATGGGATGTTCGGAAGATGGACATAGAAAAAGGAAAATTATTAATTAAACTTAGAGA TGGCGAAGTTATTAAGTTTAAATTAGATGAAGTAGAAGATGCAATGAGGGCAGGATGTAAAGTTTGCGGTGATTTTTCAG GAATTGTGGCAGACCTCTCTGTTGGAAATGTGGGAGCTCCCTCAAATTATTCAACCATTCTTATAAGAAATGATTGGGGA GCAGGATTTTTCAAAAGAGCCGTAGATAATGAATATGTTGAATATGGAGAAGGAGTAAATATGAATGCAGTAGAAAAACT TGTTAAATTAAAAAAACAAAGAGTAAAACAATAA
Upstream 100 bases:
>100_bases AATAATTAATTATTATAATGATAATATTTAGAAATATTGGTAATAATATCGGTGATTAATAAATATAACTCATAAACATA AAACATAAACGGTGTTAATT
Downstream 100 bases:
>100_bases ATATAAATATATAATACACTATTTTTTTATTATTTTTTTATTGCACCATCTTTTAACAATTTCCTTTATTATATCGTAGG AACTATGGAAATCACAATTA
Product: coenzyme F420 hydrogenase/dehydrogenase beta subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ
Sequences:
>Translated_357_residues MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ >Mature_357_residues MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ
Specific function: Unknown
COG id: COG1035
COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR007516 - InterPro: IPR007525 [H]
Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]
EC number: NA
Molecular weight: Translated: 39749; Mature: 39749
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYP CCCCCCCHHHHCCHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCC VSAEFCKTTLYDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGV CCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCCCH VSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEVLKSAGSRYNWNVPILRALKD HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH AVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI HHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLS HHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHEEECC VGNVGAPSNYSTILIRNDWGAGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ CCCCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYP CCCCCCCHHHHCCHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCC VSAEFCKTTLYDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGV CCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCCCH VSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEVLKSAGSRYNWNVPILRALKD HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH AVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI HHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLS HHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHEEECC VGNVGAPSNYSTILIRNDWGAGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ CCCCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]