Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401725

Identifier: 150401725

GI number: 150401725

Start: 1364526

End: 1365599

Strand: Direct

Name: 150401725

Synonym: Maeo_1303

Alternate gene names: NA

Gene position: 1364526-1365599 (Clockwise)

Preceding gene: 150401724

Following gene: 150401728

Centisome position: 86.94

GC content: 34.17

Gene sequence:

>1074_bases
ATGAATTCTTATTTAAATTTGAAAGAGGAAGTTTGGGACAAAGATATTTGTTCGGGTTGTGGTGCATGTGTAGCAGTGTG
CCCCGTAGATAATATCTATTTTAAAGAAGATAGCCCTATAAAATTCATATGTGATGAATGTGCATGTATAATCTCCCCTG
TTGAAGAAATAGAATACCCAGTTTCTGCTGAATTCTGTAAGACAACTCTTTACGATGTCCCTTGTGGTGCATGTTATGGC
GCCTGCCCAAGAACAAAAAATAAAGTTATTCCAACGGTGAAAAACGGAATTGGTAGAGTGCTACAAAGTGTAAAGGCAAA
ATCTAAAATAGAAGTAAAAGAAGCCCAAAGTGGAGGCGTAGTTTCTGCCATATTGGCAAGTGCTTTTGATGAAGGATTAA
TTGATGGTGCCATTGTAATGATGGAGGACAAATGGACAATGGAACCACAATCCTATTTAGCAACATCAAAAGAGGAAGTT
TTAAAATCCGCAGGAAGTAGATATAACTGGAATGTGCCAATACTTAGGGCTTTAAAAGATGCCGTAATGGTTAAAAAGTT
AAAGAAAATAGCAATTGTAGGAACTCCATGTGTAATGAATGCAGTGCATCAAATAATGGCATCAGACAATGACCTTTTAA
AACCATTTAAAGATACAATAAGGTTAAAAATAGGTTTATTCTGTTTCGAAACCTACAATTATGAAAAAATGATGGAAATA
TTTGAAAAAAATAATATAAATCCATGGGATGTTCGGAAGATGGACATAGAAAAAGGAAAATTATTAATTAAACTTAGAGA
TGGCGAAGTTATTAAGTTTAAATTAGATGAAGTAGAAGATGCAATGAGGGCAGGATGTAAAGTTTGCGGTGATTTTTCAG
GAATTGTGGCAGACCTCTCTGTTGGAAATGTGGGAGCTCCCTCAAATTATTCAACCATTCTTATAAGAAATGATTGGGGA
GCAGGATTTTTCAAAAGAGCCGTAGATAATGAATATGTTGAATATGGAGAAGGAGTAAATATGAATGCAGTAGAAAAACT
TGTTAAATTAAAAAAACAAAGAGTAAAACAATAA

Upstream 100 bases:

>100_bases
AATAATTAATTATTATAATGATAATATTTAGAAATATTGGTAATAATATCGGTGATTAATAAATATAACTCATAAACATA
AAACATAAACGGTGTTAATT

Downstream 100 bases:

>100_bases
ATATAAATATATAATACACTATTTTTTTATTATTTTTTTATTGCACCATCTTTTAACAATTTCCTTTATTATATCGTAGG
AACTATGGAAATCACAATTA

Product: coenzyme F420 hydrogenase/dehydrogenase beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG
ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV
LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI
FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG
AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ

Sequences:

>Translated_357_residues
MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG
ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV
LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI
FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG
AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ
>Mature_357_residues
MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYPVSAEFCKTTLYDVPCGACYG
ACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEV
LKSAGSRYNWNVPILRALKDAVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI
FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLSVGNVGAPSNYSTILIRNDWG
AGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525 [H]

Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: NA

Molecular weight: Translated: 39749; Mature: 39749

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYP
CCCCCCCHHHHCCHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCC
VSAEFCKTTLYDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGV
CCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCCCH
VSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEVLKSAGSRYNWNVPILRALKD
HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI
HHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH
FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLS
HHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHEEECC
VGNVGAPSNYSTILIRNDWGAGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ
CCCCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSYLNLKEEVWDKDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACIISPVEEIEYP
CCCCCCCHHHHCCHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCC
VSAEFCKTTLYDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGV
CCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHCCCCCH
VSAILASAFDEGLIDGAIVMMEDKWTMEPQSYLATSKEEVLKSAGSRYNWNVPILRALKD
HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
AVMVKKLKKIAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEI
HHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEECCCHHHHHHH
FEKNNINPWDVRKMDIEKGKLLIKLRDGEVIKFKLDEVEDAMRAGCKVCGDFSGIVADLS
HHHCCCCCCCCEEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHEEECC
VGNVGAPSNYSTILIRNDWGAGFFKRAVDNEYVEYGEGVNMNAVEKLVKLKKQRVKQ
CCCCCCCCCCEEEEEECCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]