Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401711
Identifier: 150401711
GI number: 150401711
Start: 1348012
End: 1348524
Strand: Direct
Name: 150401711
Synonym: Maeo_1289
Alternate gene names: NA
Gene position: 1348012-1348524 (Clockwise)
Preceding gene: 150401710
Following gene: 150401715
Centisome position: 85.89
GC content: 28.65
Gene sequence:
>513_bases ATGAAAGCACATCAACGATTACTATTAAGTTTGGATTCCAATAACTTTATAGACGAATTTAAAAAGATTCTTTTAGAATT AAATGTTCCTTTGAAGGAATTTTCAGAATTGTCTGATATACCATATAGCACATTATATAAGGTAATTCAGGGCAGGGATT TTAGAATATCCACTTTAATAAAAATAATAGATACAATTAAAAAATTTGAACAAAATGATAACGAATTAGATAAAATAGCC GTGATTGCAGCACGACCTGCTTTAAATCAAATTCAACATAAAATATTTTCAGTAAATGGAAAGGATTATTTATTAAAAGA ATATCCTTCAAATACTCTTGAAGAATGCATAACAGCAGCAATACTGGCAGAACGAGAAGGCGTTAAGGCAATAATTTGTG CCCCCATTGTTAGTTCAAGTATTGAAAAAGTTGTAAGAATTCCGGTTGCAGTAGTTATTCCAAAAAAAGAAGAGTTTATA AATGCTCTTAAAATAGTGGCAAATAAAATATAA
Upstream 100 bases:
>100_bases ATATTGATTATATCGTATAATTATAACCTAATATATATAATTAATATTTATATATTTATTTTCTACATATTATCCTTTCT TTTTTATATATTGTGAGATT
Downstream 100 bases:
>100_bases TAAAGTTAATAAAAAGTAAAAAATAATGAAGAAACATAAATGAAGATATGATATATTTTATTTTAAATCATTATTATTAA TAATTTTATTGTATTTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKAHQRLLLSLDSNNFIDEFKKILLELNVPLKEFSELSDIPYSTLYKVIQGRDFRISTLIKIIDTIKKFEQNDNELDKIA VIAARPALNQIQHKIFSVNGKDYLLKEYPSNTLEECITAAILAEREGVKAIICAPIVSSSIEKVVRIPVAVVIPKKEEFI NALKIVANKI
Sequences:
>Translated_170_residues MKAHQRLLLSLDSNNFIDEFKKILLELNVPLKEFSELSDIPYSTLYKVIQGRDFRISTLIKIIDTIKKFEQNDNELDKIA VIAARPALNQIQHKIFSVNGKDYLLKEYPSNTLEECITAAILAEREGVKAIICAPIVSSSIEKVVRIPVAVVIPKKEEFI NALKIVANKI >Mature_170_residues MKAHQRLLLSLDSNNFIDEFKKILLELNVPLKEFSELSDIPYSTLYKVIQGRDFRISTLIKIIDTIKKFEQNDNELDKIA VIAARPALNQIQHKIFSVNGKDYLLKEYPSNTLEECITAAILAEREGVKAIICAPIVSSSIEKVVRIPVAVVIPKKEEFI NALKIVANKI
Specific function: Unknown
COG id: COG4800
COG function: function code K; Predicted transcriptional regulator with an HTH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 - InterPro: IPR016472 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 19248; Mature: 19248
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHQRLLLSLDSNNFIDEFKKILLELNVPLKEFSELSDIPYSTLYKVIQGRDFRISTLI CCCHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH KIIDTIKKFEQNDNELDKIAVIAARPALNQIQHKIFSVNGKDYLLKEYPSNTLEECITAA HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH ILAEREGVKAIICAPIVSSSIEKVVRIPVAVVIPKKEEFINALKIVANKI HHHHCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MKAHQRLLLSLDSNNFIDEFKKILLELNVPLKEFSELSDIPYSTLYKVIQGRDFRISTLI CCCHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH KIIDTIKKFEQNDNELDKIAVIAARPALNQIQHKIFSVNGKDYLLKEYPSNTLEECITAA HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH ILAEREGVKAIICAPIVSSSIEKVVRIPVAVVIPKKEEFINALKIVANKI HHHHCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]