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The map label for this gene is mcrD [H]

Identifier: 150401687

GI number: 150401687

Start: 1329176

End: 1329667

Strand: Direct

Name: mcrD [H]

Synonym: Maeo_1265

Alternate gene names: 150401687

Gene position: 1329176-1329667 (Clockwise)

Preceding gene: 150401686

Following gene: 150401688

Centisome position: 84.69

GC content: 35.57

Gene sequence:

>492_bases
ATGATTGAAATTGAAGTCTTTCCCCACAGATTTTTAAAGGCAGACACCACTGAAAAGTTCTTAAATGACATATATTCTAT
TGAAACCGTGGAACGAGTTATTGTCCATGGTCAGCCATTACCTAAAACCGTATATTATGGTCCTGCAAGAGGCACTCCTG
TAAATCACCCTGAAAGAAAAGAAGTTCTTGTTAATGGTGTGCCTGTGGAGCTCACTGTAATGGCAGGTAGATTTTGGATA
TTGTTGGAGAATGATAATGAATTAAATAAAATCGAGGAAATTTGTAAGTCATTATTTCCATACGGTTACAACTTAAATGT
TGGTAAATTTACCAGGGATTCCCCGACCACAACAGATTATATGAAATACGGTGAAAAACTGGTAAATAGTATGGATAGAA
AAATGATCGGCCTTACAGATCCAAGAAGTAAATTCGCATCCTCTGTTAAAATGATTCCAAAAAATGAAAATGCCGAATGT
GAGCAAAATTAA

Upstream 100 bases:

>100_bases
ATGTAATTGAAGGAGCTATTGAGATAAAGGATAAAATTTAAATTATCAATTGCTCATATATCTTTTATTCCCGGTATTTA
ACTTATTGGTAGGTAATATT

Downstream 100 bases:

>100_bases
GAGGATAGTGATTTTATGCCAGTTGGTAGAAAAGAACAGATAGTCGATTGCAGGGCAGTAAGAGGATTAGGTGAAGGCGG
AGGATTGGCCCAGAGAGGAA

Product: methyl-coenzyme M reductase, protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIEIEVFPHRFLKADTTEKFLNDIYSIETVERVIVHGQPLPKTVYYGPARGTPVNHPERKEVLVNGVPVELTVMAGRFWI
LLENDNELNKIEEICKSLFPYGYNLNVGKFTRDSPTTTDYMKYGEKLVNSMDRKMIGLTDPRSKFASSVKMIPKNENAEC
EQN

Sequences:

>Translated_163_residues
MIEIEVFPHRFLKADTTEKFLNDIYSIETVERVIVHGQPLPKTVYYGPARGTPVNHPERKEVLVNGVPVELTVMAGRFWI
LLENDNELNKIEEICKSLFPYGYNLNVGKFTRDSPTTTDYMKYGEKLVNSMDRKMIGLTDPRSKFASSVKMIPKNENAEC
EQN
>Mature_163_residues
MIEIEVFPHRFLKADTTEKFLNDIYSIETVERVIVHGQPLPKTVYYGPARGTPVNHPERKEVLVNGVPVELTVMAGRFWI
LLENDNELNKIEEICKSLFPYGYNLNVGKFTRDSPTTTDYMKYGEKLVNSMDRKMIGLTDPRSKFASSVKMIPKNENAEC
EQN

Specific function: Unknown

COG id: COG4055

COG function: function code H; Methyl coenzyme M reductase, subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003901
- ProDom:   PD005228 [H]

Pfam domain/function: PF02505 MCR_D [H]

EC number: NA

Molecular weight: Translated: 18731; Mature: 18731

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIEVFPHRFLKADTTEKFLNDIYSIETVERVIVHGQPLPKTVYYGPARGTPVNHPERK
CEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH
EVLVNGVPVELTVMAGRFWILLENDNELNKIEEICKSLFPYGYNLNVGKFTRDSPTTTDY
HEEECCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHH
MKYGEKLVNSMDRKMIGLTDPRSKFASSVKMIPKNENAECEQN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEIEVFPHRFLKADTTEKFLNDIYSIETVERVIVHGQPLPKTVYYGPARGTPVNHPERK
CEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH
EVLVNGVPVELTVMAGRFWILLENDNELNKIEEICKSLFPYGYNLNVGKFTRDSPTTTDY
HEEECCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHH
MKYGEKLVNSMDRKMIGLTDPRSKFASSVKMIPKNENAECEQN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3185509 [H]