Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is mcrB [H]

Identifier: 150401686

GI number: 150401686

Start: 1327785

End: 1329116

Strand: Direct

Name: mcrB [H]

Synonym: Maeo_1264

Alternate gene names: 150401686

Gene position: 1327785-1329116 (Clockwise)

Preceding gene: 150401685

Following gene: 150401687

Centisome position: 84.6

GC content: 36.86

Gene sequence:

>1332_bases
ATGGTAAAGTATGAAGACAAAATAAACTTATATGATGCAAAAGGAAATCTTGCAGAAGAAAATGTACCATTAGAGGCTAT
TAGCCCCTTATACAACCCAGTTGTAAAAGATATGGTAAAGAGCATAAAAAGAACAGTAGCTGTTAATTTGGCAGGAATTG
AAGCTACATTGAAAGCAGGAACAATTGGAGGTAAAGCTTGTAGAGTTCCAGGTAGAACACTTGACTTACCAATTGTAGAC
GAAGCAGAAGCAATAATGGATAAAGTTGAAAAGATATTAAAAATATCTGAAGACGACGATACAAACATTAGAACAATAAA
CGGCGGAAAACAAGCTGTTGTGCAAGTTCCATCTAAAAGATTGGATATAGCTGCTGAATATTCAGTATCTATGTTAAGCA
CAGGTATGGCATTGAAAGAAGCTATTATTGATACATTTGATGTTGACATGTTTGATGGTTCCACAGTGCATGCAGCAATT
GTAGGAAGATACCCACAAGTTATGGATTATATGGGTGGAAATATTGCTTCACTCTTAGGAGCTCCATCAAATATGGAAGG
ATTAGGTTATGCTTTAAGAAACATCATGGTAAATCACTATGTTGCTACAACAAAGAAAAACCTCATGAATGCAGTTGCAT
TTTCCTCAATTATGGAACAAACAGCAATGTTTGAAATGGGAGACGCAATTGGTTCATTCGAAAGAATGCACTTATTGGGT
CTCGGATACCAAGGATTAAATGCAGATAACATTGTAATAGATTTAGTGAAAGCTAACGCAAGTGGAACAGTAGGAACTGT
TGTAGCTTCCGTTGTAGAAAGAGCTCTTGAAGACAAAGTAATTGCAGAAGATAAAACAATGAATTCAGGATTCACAATGT
ATAAACCAGTAGATGTTGCTAAGTGGAATGCTTATGCAGCAGCAGGTTTAGTTGCAGCATCCATTGTAAATTGTGGTGCA
GCAAGAGCAGCTCAAAATGTTGCTTCAACAATCTTATATTACAATGATATCTTGGAATACGAAACAGGATTACCTGGAAC
TGACTACGGTAGATCCGAAGGTACAGCAGTAGGATTCAGTTTCTTCTCACACTCAATTTATGGTGGTGGAGGACCTGGTA
TCTTTACAGGAAACCACGTAGTAACAAGACACTCAAAAGGATTTGCTATACCGCCTGTAACAGCAGCATTATGTGTAGAT
GCAGGAACTCAGATGTTCTCACCTGAGAAAACATCAGCATTAGTTGGTGCAGTATACAGTGATATTCCAGAATTCAGAGA
ACCATTAAAACATGTAATTGAAGGAGCTATTGAGATAAAGGATAAAATTTAA

Upstream 100 bases:

>100_bases
TAATATAAATATGTTTTGATTTCTCTTCAATGGAAAATATAATATATATATAAAAATATAGGTTATCGTGCATATATCAA
ATTTAGTAGGAGTGGTTCCT

Downstream 100 bases:

>100_bases
ATTATCAATTGCTCATATATCTTTTATTCCCGGTATTTAACTTATTGGTAGGTAATATTATGATTGAAATTGAAGTCTTT
CCCCACAGATTTTTAAAGGC

Product: coenzyme-B sulfoethylthiotransferase

Products: NA

Alternate protein names: Coenzyme-B sulfoethylthiotransferase beta [H]

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MVKYEDKINLYDAKGNLAEENVPLEAISPLYNPVVKDMVKSIKRTVAVNLAGIEATLKAGTIGGKACRVPGRTLDLPIVD
EAEAIMDKVEKILKISEDDDTNIRTINGGKQAVVQVPSKRLDIAAEYSVSMLSTGMALKEAIIDTFDVDMFDGSTVHAAI
VGRYPQVMDYMGGNIASLLGAPSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFSSIMEQTAMFEMGDAIGSFERMHLLG
LGYQGLNADNIVIDLVKANASGTVGTVVASVVERALEDKVIAEDKTMNSGFTMYKPVDVAKWNAYAAAGLVAASIVNCGA
ARAAQNVASTILYYNDILEYETGLPGTDYGRSEGTAVGFSFFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVTAALCVD
AGTQMFSPEKTSALVGAVYSDIPEFREPLKHVIEGAIEIKDKI

Sequences:

>Translated_443_residues
MVKYEDKINLYDAKGNLAEENVPLEAISPLYNPVVKDMVKSIKRTVAVNLAGIEATLKAGTIGGKACRVPGRTLDLPIVD
EAEAIMDKVEKILKISEDDDTNIRTINGGKQAVVQVPSKRLDIAAEYSVSMLSTGMALKEAIIDTFDVDMFDGSTVHAAI
VGRYPQVMDYMGGNIASLLGAPSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFSSIMEQTAMFEMGDAIGSFERMHLLG
LGYQGLNADNIVIDLVKANASGTVGTVVASVVERALEDKVIAEDKTMNSGFTMYKPVDVAKWNAYAAAGLVAASIVNCGA
ARAAQNVASTILYYNDILEYETGLPGTDYGRSEGTAVGFSFFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVTAALCVD
AGTQMFSPEKTSALVGAVYSDIPEFREPLKHVIEGAIEIKDKI
>Mature_443_residues
MVKYEDKINLYDAKGNLAEENVPLEAISPLYNPVVKDMVKSIKRTVAVNLAGIEATLKAGTIGGKACRVPGRTLDLPIVD
EAEAIMDKVEKILKISEDDDTNIRTINGGKQAVVQVPSKRLDIAAEYSVSMLSTGMALKEAIIDTFDVDMFDGSTVHAAI
VGRYPQVMDYMGGNIASLLGAPSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFSSIMEQTAMFEMGDAIGSFERMHLLG
LGYQGLNADNIVIDLVKANASGTVGTVVASVVERALEDKVIAEDKTMNSGFTMYKPVDVAKWNAYAAAGLVAASIVNCGA
ARAAQNVASTILYYNDILEYETGLPGTDYGRSEGTAVGFSFFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVTAALCVD
AGTQMFSPEKTSALVGAVYSDIPEFREPLKHVIEGAIEIKDKI

Specific function: Reduction of methyl-coenzyme M (2-(methylthio) ethanesulfonic acid) with 7-mercaptoheptanoylthreonine phosphate to methane and an heterodisulfide [H]

COG id: COG4054

COG function: function code H; Methyl coenzyme M reductase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022681
- InterPro:   IPR008924
- InterPro:   IPR015823
- InterPro:   IPR003179
- InterPro:   IPR022679
- InterPro:   IPR022680
- InterPro:   IPR009024 [H]

Pfam domain/function: PF02241 MCR_beta; PF02783 MCR_beta_N [H]

EC number: =2.8.4.1 [H]

Molecular weight: Translated: 47245; Mature: 47245

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYEDKINLYDAKGNLAEENVPLEAISPLYNPVVKDMVKSIKRTVAVNLAGIEATLKAG
CCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECC
TIGGKACRVPGRTLDLPIVDEAEAIMDKVEKILKISEDDDTNIRTINGGKQAVVQVPSKR
CCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCHH
LDIAAEYSVSMLSTGMALKEAIIDTFDVDMFDGSTVHAAIVGRYPQVMDYMGGNIASLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHCCCCHHHHHC
APSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFSSIMEQTAMFEMGDAIGSFERMHLLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LGYQGLNADNIVIDLVKANASGTVGTVVASVVERALEDKVIAEDKTMNSGFTMYKPVDVA
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCH
KWNAYAAAGLVAASIVNCGAARAAQNVASTILYYNDILEYETGLPGTDYGRSEGTAVGFS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHH
FFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVTAALCVDAGTQMFSPEKTSALVGAVYS
HHHCCCCCCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DIPEFREPLKHVIEGAIEIKDKI
CCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKYEDKINLYDAKGNLAEENVPLEAISPLYNPVVKDMVKSIKRTVAVNLAGIEATLKAG
CCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECC
TIGGKACRVPGRTLDLPIVDEAEAIMDKVEKILKISEDDDTNIRTINGGKQAVVQVPSKR
CCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCHH
LDIAAEYSVSMLSTGMALKEAIIDTFDVDMFDGSTVHAAIVGRYPQVMDYMGGNIASLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHCCCCHHHHHC
APSNMEGLGYALRNIMVNHYVATTKKNLMNAVAFSSIMEQTAMFEMGDAIGSFERMHLLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LGYQGLNADNIVIDLVKANASGTVGTVVASVVERALEDKVIAEDKTMNSGFTMYKPVDVA
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCH
KWNAYAAAGLVAASIVNCGAARAAQNVASTILYYNDILEYETGLPGTDYGRSEGTAVGFS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHH
FFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVTAALCVDAGTQMFSPEKTSALVGAVYS
HHHCCCCCCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DIPEFREPLKHVIEGAIEIKDKI
CCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA