Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401514
Identifier: 150401514
GI number: 150401514
Start: 1140212
End: 1140397
Strand: Reverse
Name: 150401514
Synonym: Maeo_1091
Alternate gene names: NA
Gene position: 1140397-1140212 (Counterclockwise)
Preceding gene: 150401515
Following gene: 150401510
Centisome position: 72.66
GC content: 31.18
Gene sequence:
>186_bases ATGAGTGTAATAATTAACTACAACAAATGTGATGGAGTAGATTGTGCAGAATGTATGAATGCATGTCCTATGGAAGTTTT TACAATTGAAGATAATAAAGTAGTAGTATCAAAAGAAGATGAATGCACATTTTGCATGATTTGCGAGGATGTATGTCCAA ATGGTGCAGTAAAAGTTAAAGATTAA
Upstream 100 bases:
>100_bases GAATAAAACACGATATATTTAGCATGATATAATTTATATATAAAATTATATATAATATGTGCATTATGGAAAATTAACCA AATAACGAAGTGGTGAAAAA
Downstream 100 bases:
>100_bases ATATATAATCTATTTAACTTATTATTTTTTAGTTATTTTATTTTTTTTATTTATCTTCCTGTTTTTCTTTTATGCCGTCC ATTTCGTCAAGGGCATCAAA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSVIINYNKCDGVDCAECMNACPMEVFTIEDNKVVVSKEDECTFCMICEDVCPNGAVKVKD
Sequences:
>Translated_61_residues MSVIINYNKCDGVDCAECMNACPMEVFTIEDNKVVVSKEDECTFCMICEDVCPNGAVKVKD >Mature_60_residues SVIINYNKCDGVDCAECMNACPMEVFTIEDNKVVVSKEDECTFCMICEDVCPNGAVKVKD
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 6745; Mature: 6614
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.1 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 19.7 %Cys+Met (Translated Protein) 13.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 18.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIINYNKCDGVDCAECMNACPMEVFTIEDNKVVVSKEDECTFCMICEDVCPNGAVKVK CEEEEECCCCCCCCHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCEEEEC D C >Mature Secondary Structure SVIINYNKCDGVDCAECMNACPMEVFTIEDNKVVVSKEDECTFCMICEDVCPNGAVKVK EEEEECCCCCCCCHHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCEEEEC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1986796 [H]