Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150398654
Identifier: 150398654
GI number: 150398654
Start: 3675974
End: 3676465
Strand: Direct
Name: 150398654
Synonym: Smed_3468
Alternate gene names: NA
Gene position: 3675974-3676465 (Clockwise)
Preceding gene: 150398652
Following gene: 150398657
Centisome position: 97.2
GC content: 65.24
Gene sequence:
>492_bases ATGACCGAAGCGATCGAGGGGGGCTGCTTCTGCGGCCTCGTGCGATACCGGTTGAAGGCGCGGCCGATGTTCGTGCCCTG CTGCCACTGCAGCGATTGCCAGCGGCAACTGGGCAGCGCCTTCGTGATAAACGGCATCGTCGAGGCGGAAAATGTCGAAA TTCTCCAGGGCGCGCCCGTGACGATCACGCTTTCGACGGACAGCGGCCGCCCGCATGACGTCTATCGTTGCGCCCGGTGC CAATCGCCGCTCTGGAGCGATTATGGCCGGCGCAAATGGCTCTCCTTCCTCCGCCTCGCAACGCTCGACCGGCCGTCGGC TTTTACCCCGGACGTGCATATCTACACCCGCTCGAAGCTGGATTGGGTGCCGCTACCGGAGGGCGCCAGGGATTTCGAGG CGTATTACGACGTCAAGGCGGAGTGGCCGAAGGAGAGCCTGGAGCGCTTGAACGAGGCGCGCGCACGAGCGTGGGGAGCG GCGGGGTCGTGA
Upstream 100 bases:
>100_bases ACGCCGCATCGTCCGTGGTCAATCTTTTCCTTGGGGAGCGGCGACCCGCAGAGGCGCTTGCCGCCGCTGAACGGCCATCC GGCTATGGGGAGGTGGAGCG
Downstream 100 bases:
>100_bases TCGAGGCGCAGGATGCGGGCGAAAGCCGCGCCGCAGAACTGCCGGTGTTTCGCCGGCGGCAATCCGCGTCCTTCGGCGAA GGCGTGTGTATCAGCGATCG
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTEAIEGGCFCGLVRYRLKARPMFVPCCHCSDCQRQLGSAFVINGIVEAENVEILQGAPVTITLSTDSGRPHDVYRCARC QSPLWSDYGRRKWLSFLRLATLDRPSAFTPDVHIYTRSKLDWVPLPEGARDFEAYYDVKAEWPKESLERLNEARARAWGA AGS
Sequences:
>Translated_163_residues MTEAIEGGCFCGLVRYRLKARPMFVPCCHCSDCQRQLGSAFVINGIVEAENVEILQGAPVTITLSTDSGRPHDVYRCARC QSPLWSDYGRRKWLSFLRLATLDRPSAFTPDVHIYTRSKLDWVPLPEGARDFEAYYDVKAEWPKESLERLNEARARAWGA AGS >Mature_162_residues TEAIEGGCFCGLVRYRLKARPMFVPCCHCSDCQRQLGSAFVINGIVEAENVEILQGAPVTITLSTDSGRPHDVYRCARCQ SPLWSDYGRRKWLSFLRLATLDRPSAFTPDVHIYTRSKLDWVPLPEGARDFEAYYDVKAEWPKESLERLNEARARAWGAA GS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18417; Mature: 18286
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAIEGGCFCGLVRYRLKARPMFVPCCHCSDCQRQLGSAFVINGIVEAENVEILQGAPV CCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCEEEECCEECCCCEEEECCCCE TITLSTDSGRPHDVYRCARCQSPLWSDYGRRKWLSFLRLATLDRPSAFTPDVHIYTRSKL EEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC DWVPLPEGARDFEAYYDVKAEWPKESLERLNEARARAWGAAGS CEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEAIEGGCFCGLVRYRLKARPMFVPCCHCSDCQRQLGSAFVINGIVEAENVEILQGAPV CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCEEEECCEECCCCEEEECCCCE TITLSTDSGRPHDVYRCARCQSPLWSDYGRRKWLSFLRLATLDRPSAFTPDVHIYTRSKL EEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC DWVPLPEGARDFEAYYDVKAEWPKESLERLNEARARAWGAAGS CEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA