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The map label for this gene is 150398626

Identifier: 150398626

GI number: 150398626

Start: 3646001

End: 3646723

Strand: Direct

Name: 150398626

Synonym: Smed_3440

Alternate gene names: NA

Gene position: 3646001-3646723 (Clockwise)

Preceding gene: 150398625

Following gene: 150398627

Centisome position: 96.41

GC content: 63.07

Gene sequence:

>723_bases
ATGATCGTCGAAATCGATGCCGACAGCCTCCCCGTGGACCGGGGTCCGAAGGACAGGGGCCCGAAGGGCGGGAGCGCGAA
GGACGGGGACGGCAATAACCGGACCTGCATAGTGACGCGCGAAAGCGGTTCTCCTGAAGAGCTGATCCGCTTCGTTGCCG
GGCCCGACGGGGTCGTCGTCGCGGATCTGAAGCGGCAACTCCCGGGGCGCGGATGCTGGGTGAAAGCCGAGCGGCAGCTC
GTGGAAAAGGCGGTGGCGAAGAAGCTCTTCGCCCGCGCCCTTCGCGCCGAAGTAAAGGCGAATGCCGGGCTCGCGGACGA
AGTCGAGAGACTTCTCGCCGAACAGCTCGCGGGTATGATGAACATGGCGCGTAAGGCCGGCCAGTTCATCTCCGGCGCAA
CCAAGACGGAGCAGGCGGTGCGCGGACTAGCCGCGCTTGCCGTTTTTCATGCGATCGATGCGGCCGCCGATGGCGTTCGC
AAGATAGATAAGGCTCGCAAGGCGATGAGTTTCGTCAGCGAGGATGAAACGGAAATACCTGCTTTCCGCCCCTTTACGGG
GGCGGAAATGGACGGACTTTTGGGAAGTAATGCCTTTATCCATGCCGCAGCGCTTGCAGGGCAGGCCGGTGAAGGTGTAG
TGAAGCGCGCAATCATGCTCGAAAAGTACCGTGGATCCGTCCCGGTCCGGGCCGAAGGCGGCGCTGGCCAGCCACAGCAA
TGA

Upstream 100 bases:

>100_bases
GGATCACCGAAGAGGATCTGGCCAAACAACAGGAGGAAGAGCCGGAACAGGATGAGACGATCGAAGTCGCCGAAGGCGCG
GATCAGGACGCCTGATCGCG

Downstream 100 bases:

>100_bases
AGCGCGTCACCGGCAGAGGCCGGCATAGCGAGCATTGCTTGAGACAATTTGGAAGACAGGGTCAGGGGTTTCGTATCCGG
CCCTGATCGCTAGGAACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIVEIDADSLPVDRGPKDRGPKGGSAKDGDGNNRTCIVTRESGSPEELIRFVAGPDGVVVADLKRQLPGRGCWVKAERQL
VEKAVAKKLFARALRAEVKANAGLADEVERLLAEQLAGMMNMARKAGQFISGATKTEQAVRGLAALAVFHAIDAAADGVR
KIDKARKAMSFVSEDETEIPAFRPFTGAEMDGLLGSNAFIHAAALAGQAGEGVVKRAIMLEKYRGSVPVRAEGGAGQPQQ

Sequences:

>Translated_240_residues
MIVEIDADSLPVDRGPKDRGPKGGSAKDGDGNNRTCIVTRESGSPEELIRFVAGPDGVVVADLKRQLPGRGCWVKAERQL
VEKAVAKKLFARALRAEVKANAGLADEVERLLAEQLAGMMNMARKAGQFISGATKTEQAVRGLAALAVFHAIDAAADGVR
KIDKARKAMSFVSEDETEIPAFRPFTGAEMDGLLGSNAFIHAAALAGQAGEGVVKRAIMLEKYRGSVPVRAEGGAGQPQQ
>Mature_240_residues
MIVEIDADSLPVDRGPKDRGPKGGSAKDGDGNNRTCIVTRESGSPEELIRFVAGPDGVVVADLKRQLPGRGCWVKAERQL
VEKAVAKKLFARALRAEVKANAGLADEVERLLAEQLAGMMNMARKAGQFISGATKTEQAVRGLAALAVFHAIDAAADGVR
KIDKARKAMSFVSEDETEIPAFRPFTGAEMDGLLGSNAFIHAAALAGQAGEGVVKRAIMLEKYRGSVPVRAEGGAGQPQQ

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25333; Mature: 25333

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVEIDADSLPVDRGPKDRGPKGGSAKDGDGNNRTCIVTRESGSPEELIRFVAGPDGVVV
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEE
ADLKRQLPGRGCWVKAERQLVEKAVAKKLFARALRAEVKANAGLADEVERLLAEQLAGMM
EHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NMARKAGQFISGATKTEQAVRGLAALAVFHAIDAAADGVRKIDKARKAMSFVSEDETEIP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AFRPFTGAEMDGLLGSNAFIHAAALAGQAGEGVVKRAIMLEKYRGSVPVRAEGGAGQPQQ
CCCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MIVEIDADSLPVDRGPKDRGPKGGSAKDGDGNNRTCIVTRESGSPEELIRFVAGPDGVVV
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEE
ADLKRQLPGRGCWVKAERQLVEKAVAKKLFARALRAEVKANAGLADEVERLLAEQLAGMM
EHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NMARKAGQFISGATKTEQAVRGLAALAVFHAIDAAADGVRKIDKARKAMSFVSEDETEIP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AFRPFTGAEMDGLLGSNAFIHAAALAGQAGEGVVKRAIMLEKYRGSVPVRAEGGAGQPQQ
CCCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA