Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150398596
Identifier: 150398596
GI number: 150398596
Start: 3614676
End: 3615560
Strand: Direct
Name: 150398596
Synonym: Smed_3407
Alternate gene names: NA
Gene position: 3614676-3615560 (Clockwise)
Preceding gene: 150398585
Following gene: 150398597
Centisome position: 95.58
GC content: 64.75
Gene sequence:
>885_bases ATGGCGTTTTACCTGATCGGAATAGATGGCGGCGGAACGAGCTGCCGTGCGGCTGTTGCAGCCTTGGACGGCCGCGTTCT CGGCCGTGGCAAAGCGGGTGCCGCGAATATCCTCACCGATCCGGAAACCGCTCTGCAGAACATAACGGACGCGGCGCGCC GGGCCTTCGAGGATGTAGGGCTCGATCCGACGGGTATTGCGGCATCGCGGGCAATCGTAGGGGTCGCTGGCCACAATGTC GGCGACGCCGTCCATTACGTGAAGAGGCGGCTTCCCTTCGCTGCGGCTGATATCGAGTCCGATGGGCTGATCGCGCTTCA GGGCGCCCTCGGGAACGGTAACGGAGCCGTGGCAATTCTTGGGACGGGCACGATCTATATCGCGCGCCGGGGCGATGAGG TCAGCTATATCGGCGGCTGGGGGTTCACGATCGGAGATCACGGCAGCGGCGCGCGAATCGGCCACGCGCTCCTGCAGGAG AGCTTGCTTGCCTATGACGGCATACACGAAGGCTCCGCCCTGACGGATTCCGTTCTTGCCGAGTTCAATAATGACCCCCG TGATATCGTCGATTTCGCGCGGCTTGCGAAGCCGGGCGAGTTCGGCCGCTATGCGCCGCGCGTTTTCGAGTATGCGGACC GAGGCGATCCTGTGGCTCTCGTCCTCTTGAAGGCTGCCGCCGCTACGGTAGACGAGGCGCTCGACGTGGTCGTTTCGAGG GGAAGCAGGAAGCTGTGCCTGCTCGGAGGACTGGCACCGCTCTATCGCCGATGGCTGGCGGACCGACATCAGCCGTGTTT CGTCGAGGCTGAGGCGGACGCGTTGACGGGTGCCGTCGCGCTCGCCGCAGCCCGCTTCGGCTCCCATTCCGGGGTCCCGG CATGA
Upstream 100 bases:
>100_bases ACATAATAAAATCAACTCGCTAGGTTGGGAGTTAACCGGGTGGTCGAAAACTGCTTGGTTAATGGTATTTTTTTGGTATC TTGTGGTGACGGAGGTCCCC
Downstream 100 bases:
>100_bases ACCAGCAGCTCGCCGCCATTTTGCCGCTCGAGACCCTGCAGTCGGGTGGCGCCGGGCCGCTTTACCTGAAGCTCAGGCAG TCGCTCGAAGAAGCGATCCT
Product: BadF/BadG/BcrA/BcrD type ATPase
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; N-Acetylglucosamine Kinase Protein; BadF/BadG/BcrA/BcrD Family ATPase; ATPase Badf/Badg/Bcra/Bcrd Type; BadF/BadG/BcrA/BcrD ATPase Family Superfamily; BadF/BadG/BcrA/BcrD ATPase Family; Glucosamine Kinase GpsK; ATPase Family Protein; Glucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase; BadF/BadG/BcrA/BcrD Type ATPase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAFYLIGIDGGGTSCRAAVAALDGRVLGRGKAGAANILTDPETALQNITDAARRAFEDVGLDPTGIAASRAIVGVAGHNV GDAVHYVKRRLPFAAADIESDGLIALQGALGNGNGAVAILGTGTIYIARRGDEVSYIGGWGFTIGDHGSGARIGHALLQE SLLAYDGIHEGSALTDSVLAEFNNDPRDIVDFARLAKPGEFGRYAPRVFEYADRGDPVALVLLKAAAATVDEALDVVVSR GSRKLCLLGGLAPLYRRWLADRHQPCFVEAEADALTGAVALAAARFGSHSGVPA
Sequences:
>Translated_294_residues MAFYLIGIDGGGTSCRAAVAALDGRVLGRGKAGAANILTDPETALQNITDAARRAFEDVGLDPTGIAASRAIVGVAGHNV GDAVHYVKRRLPFAAADIESDGLIALQGALGNGNGAVAILGTGTIYIARRGDEVSYIGGWGFTIGDHGSGARIGHALLQE SLLAYDGIHEGSALTDSVLAEFNNDPRDIVDFARLAKPGEFGRYAPRVFEYADRGDPVALVLLKAAAATVDEALDVVVSR GSRKLCLLGGLAPLYRRWLADRHQPCFVEAEADALTGAVALAAARFGSHSGVPA >Mature_293_residues AFYLIGIDGGGTSCRAAVAALDGRVLGRGKAGAANILTDPETALQNITDAARRAFEDVGLDPTGIAASRAIVGVAGHNVG DAVHYVKRRLPFAAADIESDGLIALQGALGNGNGAVAILGTGTIYIARRGDEVSYIGGWGFTIGDHGSGARIGHALLQES LLAYDGIHEGSALTDSVLAEFNNDPRDIVDFARLAKPGEFGRYAPRVFEYADRGDPVALVLLKAAAATVDEALDVVVSRG SRKLCLLGGLAPLYRRWLADRHQPCFVEAEADALTGAVALAAARFGSHSGVPA
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30403; Mature: 30271
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYLIGIDGGGTSCRAAVAALDGRVLGRGKAGAANILTDPETALQNITDAARRAFEDVG CEEEEEEECCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC LDPTGIAASRAIVGVAGHNVGDAVHYVKRRLPFAAADIESDGLIALQGALGNGNGAVAIL CCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCEEEEE GTGTIYIARRGDEVSYIGGWGFTIGDHGSGARIGHALLQESLLAYDGIHEGSALTDSVLA ECCEEEEEECCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EFNNDPRDIVDFARLAKPGEFGRYAPRVFEYADRGDPVALVLLKAAAATVDEALDVVVSR HCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GSRKLCLLGGLAPLYRRWLADRHQPCFVEAEADALTGAVALAAARFGSHSGVPA CCCEEEEECCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AFYLIGIDGGGTSCRAAVAALDGRVLGRGKAGAANILTDPETALQNITDAARRAFEDVG EEEEEEECCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC LDPTGIAASRAIVGVAGHNVGDAVHYVKRRLPFAAADIESDGLIALQGALGNGNGAVAIL CCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCEEEEE GTGTIYIARRGDEVSYIGGWGFTIGDHGSGARIGHALLQESLLAYDGIHEGSALTDSVLA ECCEEEEEECCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EFNNDPRDIVDFARLAKPGEFGRYAPRVFEYADRGDPVALVLLKAAAATVDEALDVVVSR HCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GSRKLCLLGGLAPLYRRWLADRHQPCFVEAEADALTGAVALAAARFGSHSGVPA CCCEEEEECCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA