Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is glk [H]
Identifier: 150398558
GI number: 150398558
Start: 3570692
End: 3571711
Strand: Direct
Name: glk [H]
Synonym: Smed_3369
Alternate gene names: 150398558
Gene position: 3570692-3571711 (Clockwise)
Preceding gene: 150398557
Following gene: 150398559
Centisome position: 94.42
GC content: 64.51
Gene sequence:
>1020_bases ATGCCCAATGCGAGTGACCAAAGCTTCCCCTTTCCGATTTTGATCGGCGACATCGGCGGCACCAATGCCCGCTTCGCATT GCTTACCGACGCCTATGGCGAGCCGAGGCAGCTTGAGCCGATCAGGACGGGCGATTTCGCCACCATCGAAGAGGCAATGC AGAAAAGCATCCTCGACAAGACTTCCGTCCAGCCGCGCTCGGCGATTCTTGCCGTAGCGGGGCCGATCAAGGGCGACGAG ATACCGCTGACGAATGCCCATTGGGTGATTCGCCCGAAGGATATGCTGGCGAGCCTCGGCCTCGAAGACGTGCTGATCAT CAATGATTTCGAGGCGCAGGCGCTCGCCATTGCCGCCCCGGCCGACCAGGACGTCGTGCAGATCGGCGGCGGCGCGGTCC GGCCCTTCAATTCGCGCGTCGTCCTTGGTCCGGGTACCGGTCTGGGGGTCGCGGGCCTCGTCTATGCGCAGCACAGCTGG ATACCCGTCCCCGGAGAAGGCGGGCATGTCGATTTAGGTCCGCGCACCGAGCGCGACTTTGAGATATGGCCGTTTCTGGA GCCGATCGAGGGGCGCATGGCCGGCGAGCAGATACTGTGCGGCCGCGGCATCATGAATCTCTATCGCGCGGTCTGCGCCG CCAATGGCGAAGCGGCGGTTCTCGCGGATCAGGCGGCGGTGACGACGAGTGCGTTGTCCGGTGCGGATGCCGCGGCGGTC GAAACCGTGTCGCTCTTTGCGACTTATCTCGGGCGCGTTGCCGGCGATATGGCGCTTATCTTCATGGCGCGGGGCGGGGT ATTCCTTGCCGGCGGCATTTCGCAGAAGATCCTGCCGGCGCTGATGAAGCCTGAGTTCCGCGCCGCCTTCGAGGACAAGG CGCCACATTCGGCGCTGATGCGGACGATCCCGACCTTTGCCGTCATCCACCCGATGGCCGCGCTCTCCGGCCTCGCAGCC TTTGCCCGCACGCCGAGGGACTTCGGTGTTGCAATGGAGGGACGCCGCTGGAGAAGGTGA
Upstream 100 bases:
>100_bases GGGCAACGACATGCACAAGCAAGGATATAAATCGGGCGCATGAAATGCGGCCCGCTTTACCCCGGACATCCACGCCCGCG ATCAGGACGGAAATTCTGCC
Downstream 100 bases:
>100_bases CGCCGCGGCCGGCTCCGAGACTCGCCAAATCCGCAGCAAACCACTATAGAGCCCCGGAAAGCGATGCCGGTGTGCGGTAC GCGAGCGGGCTCAGGGAAGA
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPNASDQSFPFPILIGDIGGTNARFALLTDAYGEPRQLEPIRTGDFATIEEAMQKSILDKTSVQPRSAILAVAGPIKGDE IPLTNAHWVIRPKDMLASLGLEDVLIINDFEAQALAIAAPADQDVVQIGGGAVRPFNSRVVLGPGTGLGVAGLVYAQHSW IPVPGEGGHVDLGPRTERDFEIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEAAVLADQAAVTTSALSGADAAAV ETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALMKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAA FARTPRDFGVAMEGRRWRR
Sequences:
>Translated_339_residues MPNASDQSFPFPILIGDIGGTNARFALLTDAYGEPRQLEPIRTGDFATIEEAMQKSILDKTSVQPRSAILAVAGPIKGDE IPLTNAHWVIRPKDMLASLGLEDVLIINDFEAQALAIAAPADQDVVQIGGGAVRPFNSRVVLGPGTGLGVAGLVYAQHSW IPVPGEGGHVDLGPRTERDFEIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEAAVLADQAAVTTSALSGADAAAV ETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALMKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAA FARTPRDFGVAMEGRRWRR >Mature_338_residues PNASDQSFPFPILIGDIGGTNARFALLTDAYGEPRQLEPIRTGDFATIEEAMQKSILDKTSVQPRSAILAVAGPIKGDEI PLTNAHWVIRPKDMLASLGLEDVLIINDFEAQALAIAAPADQDVVQIGGGAVRPFNSRVVLGPGTGLGVAGLVYAQHSWI PVPGEGGHVDLGPRTERDFEIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEAAVLADQAAVTTSALSGADAAAVE TVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALMKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAF ARTPRDFGVAMEGRRWRR
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial glucokinase family [H]
Homologues:
Organism=Escherichia coli, GI1788732, Length=310, Percent_Identity=36.4516129032258, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 [H]
Pfam domain/function: PF02685 Glucokinase [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 35926; Mature: 35795
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNASDQSFPFPILIGDIGGTNARFALLTDAYGEPRQLEPIRTGDFATIEEAMQKSILDK CCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TSVQPRSAILAVAGPIKGDEIPLTNAHWVIRPKDMLASLGLEDVLIINDFEAQALAIAAP CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCEEEEECC ADQDVVQIGGGAVRPFNSRVVLGPGTGLGVAGLVYAQHSWIPVPGEGGHVDLGPRTERDF CCCCCEEECCCEECCCCCEEEEECCCCCCHHHHEEECCCEEECCCCCCEECCCCCCCCCC EIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEAAVLADQAAVTTSALSGADAAAV EECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHH ETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALMKPEFRAAFEDKAPHSALM HHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCHHHHHHHHHCCHHHHHHCCCCCHHHHH RTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCC >Mature Secondary Structure PNASDQSFPFPILIGDIGGTNARFALLTDAYGEPRQLEPIRTGDFATIEEAMQKSILDK CCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TSVQPRSAILAVAGPIKGDEIPLTNAHWVIRPKDMLASLGLEDVLIINDFEAQALAIAAP CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCEEEEECC ADQDVVQIGGGAVRPFNSRVVLGPGTGLGVAGLVYAQHSWIPVPGEGGHVDLGPRTERDF CCCCCEEECCCEECCCCCEEEEECCCCCCHHHHEEECCCEEECCCCCCEECCCCCCCCCC EIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEAAVLADQAAVTTSALSGADAAAV EECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHH ETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALMKPEFRAAFEDKAPHSALM HHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCHHHHHHHHHCCHHHHHHCCCCCHHHHH RTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]