Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is mgsA [H]

Identifier: 150398557

GI number: 150398557

Start: 3570002

End: 3570382

Strand: Direct

Name: mgsA [H]

Synonym: Smed_3368

Alternate gene names: 150398557

Gene position: 3570002-3570382 (Clockwise)

Preceding gene: 150398556

Following gene: 150398558

Centisome position: 94.4

GC content: 61.42

Gene sequence:

>381_bases
ATGGCAGATCGGAAATGTCTCGCCCTGATCGCCCATGATCAGAAGAAGGATGACCTTGCGGCGTTTGCCAAGGCGAATGA
GGCGGTCCTCTCCAAGTGGAGGATCGTCGCCACAGGGACCACCGGCGGCCGTGTTCTCGACGTGTGCCCGGGGCTCGACA
TCGTCAGACTCAAGAGTGGTCCGCTCGGCGGCGACCAGCAGATCGGCGCGCTGATCGCCACGGGCGACGTGAACTGCCTG
ATTTTCTTCGTCGATCCGCTGACTGCCATGCCGCACGACGTCGACGTCAAGGCGCTGATGCGGCTTGCGATCGTCTACGA
CATTCCGATGGCGCTGAACCGCGCGACAGCCGAACAGTTGATCGATTTCAGGCGCAATTGA

Upstream 100 bases:

>100_bases
CGCCGGGCTCATGTATAGGCGCTTCAAATCGATTTAAATCGGTTCGCAGAGCGCGCCTGCCCAGACGCGTCCGGCGAACA
TTCGCCGAGAGGGCTCTCGC

Downstream 100 bases:

>100_bases
TACAACTGCATGTCGCCCAAAAGTGCGCAGCGGTTTTGGGGCAACGACATGCACAAGCACGGAAGCATGTCGCCCAAAAG
TGCGCAGCGGTTTTGGGGCA

Product: methylglyoxal synthase

Products: NA

Alternate protein names: MGS [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCL
IFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN

Sequences:

>Translated_126_residues
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCL
IFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
>Mature_125_residues
ADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCLI
FFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN

Specific function: Unknown

COG id: COG1803

COG function: function code G; Methylglyoxal synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methylglyoxal synthase family [H]

Homologues:

Organism=Escherichia coli, GI87081809, Length=118, Percent_Identity=49.1525423728814, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004363
- InterPro:   IPR018148
- InterPro:   IPR011607 [H]

Pfam domain/function: PF02142 MGS [H]

EC number: =4.2.3.3 [H]

Molecular weight: Translated: 13630; Mature: 13499

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS01335 METHYLGLYOXAL_SYNTH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSG
CCCCCEEEEEECCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEEEECCCCEEEEEECC
PLGGDQQIGALIATGDVNCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQL
CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
IDFRRN
HHHCCC
>Mature Secondary Structure 
ADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSG
CCCCEEEEEECCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEEEECCCCEEEEEECC
PLGGDQQIGALIATGDVNCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQL
CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
IDFRRN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]