Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is mgsA [H]
Identifier: 150398557
GI number: 150398557
Start: 3570002
End: 3570382
Strand: Direct
Name: mgsA [H]
Synonym: Smed_3368
Alternate gene names: 150398557
Gene position: 3570002-3570382 (Clockwise)
Preceding gene: 150398556
Following gene: 150398558
Centisome position: 94.4
GC content: 61.42
Gene sequence:
>381_bases ATGGCAGATCGGAAATGTCTCGCCCTGATCGCCCATGATCAGAAGAAGGATGACCTTGCGGCGTTTGCCAAGGCGAATGA GGCGGTCCTCTCCAAGTGGAGGATCGTCGCCACAGGGACCACCGGCGGCCGTGTTCTCGACGTGTGCCCGGGGCTCGACA TCGTCAGACTCAAGAGTGGTCCGCTCGGCGGCGACCAGCAGATCGGCGCGCTGATCGCCACGGGCGACGTGAACTGCCTG ATTTTCTTCGTCGATCCGCTGACTGCCATGCCGCACGACGTCGACGTCAAGGCGCTGATGCGGCTTGCGATCGTCTACGA CATTCCGATGGCGCTGAACCGCGCGACAGCCGAACAGTTGATCGATTTCAGGCGCAATTGA
Upstream 100 bases:
>100_bases CGCCGGGCTCATGTATAGGCGCTTCAAATCGATTTAAATCGGTTCGCAGAGCGCGCCTGCCCAGACGCGTCCGGCGAACA TTCGCCGAGAGGGCTCTCGC
Downstream 100 bases:
>100_bases TACAACTGCATGTCGCCCAAAAGTGCGCAGCGGTTTTGGGGCAACGACATGCACAAGCACGGAAGCATGTCGCCCAAAAG TGCGCAGCGGTTTTGGGGCA
Product: methylglyoxal synthase
Products: NA
Alternate protein names: MGS [H]
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCL IFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
Sequences:
>Translated_126_residues MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCL IFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN >Mature_125_residues ADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSGPLGGDQQIGALIATGDVNCLI FFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
Specific function: Unknown
COG id: COG1803
COG function: function code G; Methylglyoxal synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylglyoxal synthase family [H]
Homologues:
Organism=Escherichia coli, GI87081809, Length=118, Percent_Identity=49.1525423728814, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF02142 MGS [H]
EC number: =4.2.3.3 [H]
Molecular weight: Translated: 13630; Mature: 13499
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS01335 METHYLGLYOXAL_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSG CCCCCEEEEEECCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEEEECCCCEEEEEECC PLGGDQQIGALIATGDVNCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQL CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH IDFRRN HHHCCC >Mature Secondary Structure ADRKCLALIAHDQKKDDLAAFAKANEAVLSKWRIVATGTTGGRVLDVCPGLDIVRLKSG CCCCEEEEEECCCCCHHHHHHHHCCHHHHHCEEEEEECCCCCEEEEECCCCEEEEEECC PLGGDQQIGALIATGDVNCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQL CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH IDFRRN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]