Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is hyuA [H]
Identifier: 150398461
GI number: 150398461
Start: 3448396
End: 3450399
Strand: Direct
Name: hyuA [H]
Synonym: Smed_3269
Alternate gene names: 150398461
Gene position: 3448396-3450399 (Clockwise)
Preceding gene: 150398460
Following gene: 150398462
Centisome position: 91.18
GC content: 66.32
Gene sequence:
>2004_bases TTGACCCCGCATCTTCTCCTGGGCATCGACACCGGCGGCACCTATACCGACGCCGTTCTTTTCAGCGAAACGAAGGGCGT CGTCGCCAAGGCCAAAGCGCTCACGACCCGTCACGATCTCGCCGAGGGCGTTTCCGGTGCGGTGGAGGCAGTGCTCGCAA AGGCGGACGTGCCGGTATCGGCGATCAGCCTCGTATCGCTGTCGACGACGCTTGCCACCAATGCGCTGGTCGAAGGCCAG GGCGGCAGGGCCGGCCTGATCATGATCGGTTTCGCTCCGGACGACCTGAAGCGCGACGGTCTTCAGGACGCGCTCGGATC CGATCCTGTCCTCTTCCTTCCCGGCGGCCACAATGTCCATGGCGGCGAGACGACGCTGGACATGCGTGCGCTCGACGAGG CGCTGCCGGCGCTCGGGTCCCAGGTGTCGTCCTTCGCCGTTGCCGGCTATTTCGCGGTGCGCAACCCGGATCACGAGAAG CGTGTTCGCGATCGCATCCGCGAGGTCTCGCACCTGCCGGTAACCTGCAGCCATGAGCTTTCCTCCAAGCTTGGCGGACC CCGTCGCGCGCTGACGACGCTTCTGAATGCGCGGCTGGTCTCGATGATCGACCGGCTGATCGTCTCCTGCGAAGACTTCC TCAAGGCCCGCGGCATCGACGTGCCGATGATGGTGGTACGAGGCGACGGTGCGTTGATATCGGCCGCCGAGGCGCGGCTG CGGCCGATCGAAACGATTTTGTCGGGTCCGGCTGCGAGCCTCGTCGGCGCTCGCTATCTGACCGGCTTTGACAGCGCCGT GGTCTCCGATATCGGCGGCACGACCACCGACGTCGCCGTCCTCGAAAAAGGCCGGCCGCGCCTCGACGCCGACGGAGCTG TCGTCGGCGGCTTTCGCACCATGGTCGAGGCGGTCGCCATGCGCACATACGGCCTTGGCGGCGACTCGGAGGTGAAGATC AACGATCGTGGCCTCAAGGCCAGGCTTGATCTCGGGCCCCGCCGTTTCCTGCCCCTGAGCCTTGCGGCGGCGCTGCACGG CGACGCGGTTCTTTCGGTGCTCCAAAAGCAGTTGCGGGCGCCCCATGCCGGCCGGCATGACGGTCGCCTGGCAGTCCGCA CCGGTTTGCCCGACCATCTCGCCAGCGGGCTTCAGCCTCAGGAACAGGCCCTTTATGATCGCATAGGAATGATACCGGTG GCGCTTGCTGATCTTCTCGTCACCACGCCGCAGAGGGCGACCCTCGACAGGCTTGTAGCTCGCGGTCTGGTGCATCTCTG CGGGCTCACTCCTTCGGACGCGATGCATGTTCTCGGTCGGCAGGCGCAATGGAACGGCGAGGCCGCGCGCCTCGGCCTCG AGATTGCCGCTCGAACGAAGGACGGATCCGGCCAGCCTATCGCGGCTTCTGTCGCGGCTCTGGCGCAGATGATCGTGGAC CGGCTGACGCGGCAGTCGTCGGAGGCCATCCTGCAGGCGTGCCTCAACGAGGACGGCGCCGGAGCGATCGATCCTGCCGT CTCGCTTTCCGTTGACCGTGCGCTGAAACGGGAGCCCGGAATCGTGCGTTTTTCGCTCGGTATCGACCGGCCGCTTGTCG GGCTCGGCGCCTCCGCACCGGTCTATTATCCCGCGATCGCTGAAATGCTTTCCGCCGAACCGGCAATTCCGGCTGAAGCG GACGTGGCAAACGCCGTCGGCGCGGTTGTCGGCCAAGTGCGTACGACGGTCACCGTTTTCGTGACGACGCCGGAAGAAGG CATTTTCATCGTCAACGGTGCCGGCGCGAGCGAGCGTTTCGTCGATCAACAGGAGGCCTTCGGCGTTGCCCGCCGCCGCG CGAAAACGATGGCGCTCGAGAGCGCCCGCGCGAACGGTGCAGAGGACCCCGCCGCGACCCTTCGGGAAGAGATCGACGCG CCGGAAGTCGAGGGCAGCCGCAAGCTGATCGAGGCGCGCTTCATCGCCTCGGCAAGCGGCCGGCCGCGAATCGCACATGG CTGA
Upstream 100 bases:
>100_bases GAGGTAGAGCGGGTCGCGCTCGCGCGATGGTTTTTCCCAAGAATATGTCCTATCACCAGATGGATTTTTCCGGATTCTCA CCATTGGACTGAGCAGAAAA
Downstream 100 bases:
>100_bases TCTTTTCCGTTTTGGAAACAATTCTTCGCTTCCATGCGCAATTGACAAAGATGGGCCCGGTGGGAGATTTTCCGCGCGCG CGAGCGGGCGACGCGCTTTT
Product: hydantoinase/oxoprolinase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MTPHLLLGIDTGGTYTDAVLFSETKGVVAKAKALTTRHDLAEGVSGAVEAVLAKADVPVSAISLVSLSTTLATNALVEGQ GGRAGLIMIGFAPDDLKRDGLQDALGSDPVLFLPGGHNVHGGETTLDMRALDEALPALGSQVSSFAVAGYFAVRNPDHEK RVRDRIREVSHLPVTCSHELSSKLGGPRRALTTLLNARLVSMIDRLIVSCEDFLKARGIDVPMMVVRGDGALISAAEARL RPIETILSGPAASLVGARYLTGFDSAVVSDIGGTTTDVAVLEKGRPRLDADGAVVGGFRTMVEAVAMRTYGLGGDSEVKI NDRGLKARLDLGPRRFLPLSLAAALHGDAVLSVLQKQLRAPHAGRHDGRLAVRTGLPDHLASGLQPQEQALYDRIGMIPV ALADLLVTTPQRATLDRLVARGLVHLCGLTPSDAMHVLGRQAQWNGEAARLGLEIAARTKDGSGQPIAASVAALAQMIVD RLTRQSSEAILQACLNEDGAGAIDPAVSLSVDRALKREPGIVRFSLGIDRPLVGLGASAPVYYPAIAEMLSAEPAIPAEA DVANAVGAVVGQVRTTVTVFVTTPEEGIFIVNGAGASERFVDQQEAFGVARRRAKTMALESARANGAEDPAATLREEIDA PEVEGSRKLIEARFIASASGRPRIAHG
Sequences:
>Translated_667_residues MTPHLLLGIDTGGTYTDAVLFSETKGVVAKAKALTTRHDLAEGVSGAVEAVLAKADVPVSAISLVSLSTTLATNALVEGQ GGRAGLIMIGFAPDDLKRDGLQDALGSDPVLFLPGGHNVHGGETTLDMRALDEALPALGSQVSSFAVAGYFAVRNPDHEK RVRDRIREVSHLPVTCSHELSSKLGGPRRALTTLLNARLVSMIDRLIVSCEDFLKARGIDVPMMVVRGDGALISAAEARL RPIETILSGPAASLVGARYLTGFDSAVVSDIGGTTTDVAVLEKGRPRLDADGAVVGGFRTMVEAVAMRTYGLGGDSEVKI NDRGLKARLDLGPRRFLPLSLAAALHGDAVLSVLQKQLRAPHAGRHDGRLAVRTGLPDHLASGLQPQEQALYDRIGMIPV ALADLLVTTPQRATLDRLVARGLVHLCGLTPSDAMHVLGRQAQWNGEAARLGLEIAARTKDGSGQPIAASVAALAQMIVD RLTRQSSEAILQACLNEDGAGAIDPAVSLSVDRALKREPGIVRFSLGIDRPLVGLGASAPVYYPAIAEMLSAEPAIPAEA DVANAVGAVVGQVRTTVTVFVTTPEEGIFIVNGAGASERFVDQQEAFGVARRRAKTMALESARANGAEDPAATLREEIDA PEVEGSRKLIEARFIASASGRPRIAHG >Mature_666_residues TPHLLLGIDTGGTYTDAVLFSETKGVVAKAKALTTRHDLAEGVSGAVEAVLAKADVPVSAISLVSLSTTLATNALVEGQG GRAGLIMIGFAPDDLKRDGLQDALGSDPVLFLPGGHNVHGGETTLDMRALDEALPALGSQVSSFAVAGYFAVRNPDHEKR VRDRIREVSHLPVTCSHELSSKLGGPRRALTTLLNARLVSMIDRLIVSCEDFLKARGIDVPMMVVRGDGALISAAEARLR PIETILSGPAASLVGARYLTGFDSAVVSDIGGTTTDVAVLEKGRPRLDADGAVVGGFRTMVEAVAMRTYGLGGDSEVKIN DRGLKARLDLGPRRFLPLSLAAALHGDAVLSVLQKQLRAPHAGRHDGRLAVRTGLPDHLASGLQPQEQALYDRIGMIPVA LADLLVTTPQRATLDRLVARGLVHLCGLTPSDAMHVLGRQAQWNGEAARLGLEIAARTKDGSGQPIAASVAALAQMIVDR LTRQSSEAILQACLNEDGAGAIDPAVSLSVDRALKREPGIVRFSLGIDRPLVGLGASAPVYYPAIAEMLSAEPAIPAEAD VANAVGAVVGQVRTTVTVFVTTPEEGIFIVNGAGASERFVDQQEAFGVARRRAKTMALESARANGAEDPAATLREEIDAP EVEGSRKLIEARFIASASGRPRIAHG
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 69837; Mature: 69706
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHLLLGIDTGGTYTDAVLFSETKGVVAKAKALTTRHDLAEGVSGAVEAVLAKADVPVS CCCCEEEEECCCCCEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AISLVSLSTTLATNALVEGQGGRAGLIMIGFAPDDLKRDGLQDALGSDPVLFLPGGHNVH HHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHCCHHHHHCCCCEEEECCCCCCC GGETTLDMRALDEALPALGSQVSSFAVAGYFAVRNPDHEKRVRDRIREVSHLPVTCSHEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEECHHH SSKLGGPRRALTTLLNARLVSMIDRLIVSCEDFLKARGIDVPMMVVRGDGALISAAEARL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHH RPIETILSGPAASLVGARYLTGFDSAVVSDIGGTTTDVAVLEKGRPRLDADGAVVGGFRT HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEHHHHH MVEAVAMRTYGLGGDSEVKINDRGLKARLDLGPRRFLPLSLAAALHGDAVLSVLQKQLRA HHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PHAGRHDGRLAVRTGLPDHLASGLQPQEQALYDRIGMIPVALADLLVTTPQRATLDRLVA CCCCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH RGLVHLCGLTPSDAMHVLGRQAQWNGEAARLGLEIAARTKDGSGQPIAASVAALAQMIVD HHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHH RLTRQSSEAILQACLNEDGAGAIDPAVSLSVDRALKREPGIVRFSLGIDRPLVGLGASAP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC VYYPAIAEMLSAEPAIPAEADVANAVGAVVGQVRTTVTVFVTTPEEGIFIVNGAGASERF CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCCHHH VDQQEAFGVARRRAKTMALESARANGAEDPAATLREEIDAPEVEGSRKLIEARFIASASG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC RPRIAHG CCCCCCC >Mature Secondary Structure TPHLLLGIDTGGTYTDAVLFSETKGVVAKAKALTTRHDLAEGVSGAVEAVLAKADVPVS CCCEEEEECCCCCEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AISLVSLSTTLATNALVEGQGGRAGLIMIGFAPDDLKRDGLQDALGSDPVLFLPGGHNVH HHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHCCHHHHHCCCCEEEECCCCCCC GGETTLDMRALDEALPALGSQVSSFAVAGYFAVRNPDHEKRVRDRIREVSHLPVTCSHEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEECHHH SSKLGGPRRALTTLLNARLVSMIDRLIVSCEDFLKARGIDVPMMVVRGDGALISAAEARL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHH RPIETILSGPAASLVGARYLTGFDSAVVSDIGGTTTDVAVLEKGRPRLDADGAVVGGFRT HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEHHHHH MVEAVAMRTYGLGGDSEVKINDRGLKARLDLGPRRFLPLSLAAALHGDAVLSVLQKQLRA HHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PHAGRHDGRLAVRTGLPDHLASGLQPQEQALYDRIGMIPVALADLLVTTPQRATLDRLVA CCCCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH RGLVHLCGLTPSDAMHVLGRQAQWNGEAARLGLEIAARTKDGSGQPIAASVAALAQMIVD HHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHH RLTRQSSEAILQACLNEDGAGAIDPAVSLSVDRALKREPGIVRFSLGIDRPLVGLGASAP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC VYYPAIAEMLSAEPAIPAEADVANAVGAVVGQVRTTVTVFVTTPEEGIFIVNGAGASERF CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCCHHH VDQQEAFGVARRRAKTMALESARANGAEDPAATLREEIDAPEVEGSRKLIEARFIASASG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC RPRIAHG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]