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The map label for this gene is yaeJ [C]

Identifier: 150398446

GI number: 150398446

Start: 3436255

End: 3436689

Strand: Direct

Name: yaeJ [C]

Synonym: Smed_3254

Alternate gene names: 150398446

Gene position: 3436255-3436689 (Clockwise)

Preceding gene: 150398445

Following gene: 150398447

Centisome position: 90.86

GC content: 64.37

Gene sequence:

>435_bases
ATGGCAAGCGAACCGCTTTACATCAACGAAAACATCGTGATCGCCGGATGGGAGCTCACGGAGCAATTCGTGCTGGCCGG
CGGCCCGGGCGGGCAGAACGTCAACAAGGTCTCGACGGCCGTCCAGCTTTTCTTCGACGTGCAGGCTTCGCCGTCCCTGC
CGGAACGGGTGAGGGCCAACGCCTTGAAACTTGCCGGACGCCGCGTCTCGAAGGAGGGCGTCCTGATGATCGAGGCCAAT
CGCTTCCGCAGCCAGGAGCGCAACCGCGAGGATGCCCGCGAGCGTCTGAAGGAATTGATCCTGAAAGCCGCGGAACCGCC
GCCTCCGCCGCGCAGGAAGACGAAGCCGACCCGCGGATCGATCGAACGCCGGCTGAAGGAGAAATCTGGCCGTTCCGAAA
TCAAGAAGCTGCGCGGCCGGCCCGGCGGCGATTGA

Upstream 100 bases:

>100_bases
CCTCTTGCCTTGATTCACGTGAAACCCGGTCGCTTGCGGCCGGGTTTTGCATTTGCGGCTTGTTTTCAAGCATGCGATAG
AACGGCGGAGGAAGAACCGC

Downstream 100 bases:

>100_bases
CAGCTTGCGCAACTTGCGCCCGCTTCCCCTTGCCTTTTGCCGGCAACCGCCCTCTCTTATCTGGATAGTCTGCGGAAGAG
GAAACAACCATGGGTCTGTT

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRANALKLAGRRVSKEGVLMIEAN
RFRSQERNREDARERLKELILKAAEPPPPPRRKTKPTRGSIERRLKEKSGRSEIKKLRGRPGGD

Sequences:

>Translated_144_residues
MASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRANALKLAGRRVSKEGVLMIEAN
RFRSQERNREDARERLKELILKAAEPPPPPRRKTKPTRGSIERRLKEKSGRSEIKKLRGRPGGD
>Mature_143_residues
ASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRANALKLAGRRVSKEGVLMIEANR
FRSQERNREDARERLKELILKAAEPPPPPRRKTKPTRGSIERRLKEKSGRSEIKKLRGRPGGD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=42.962962962963, Blast_Score=99, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19921098, Length=124, Percent_Identity=37.0967741935484, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16111; Mature: 15980

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRAN
CCCCCEEECCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALKLAGRRVSKEGVLMIEANRFRSQERNREDARERLKELILKAAEPPPPPRRKTKPTRGS
HHHHHHCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
IERRLKEKSGRSEIKKLRGRPGGD
HHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASEPLYINENIVIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRAN
CCCCEEECCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALKLAGRRVSKEGVLMIEANRFRSQERNREDARERLKELILKAAEPPPPPRRKTKPTRGS
HHHHHHCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
IERRLKEKSGRSEIKKLRGRPGGD
HHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]