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The map label for this gene is ydiA [C]

Identifier: 150398401

GI number: 150398401

Start: 3385013

End: 3385834

Strand: Direct

Name: ydiA [C]

Synonym: Smed_3209

Alternate gene names: 150398401

Gene position: 3385013-3385834 (Clockwise)

Preceding gene: 150398392

Following gene: 150398402

Centisome position: 89.51

GC content: 62.04

Gene sequence:

>822_bases
GTGGAAAACCGAAAAAACTACTTCCACCTGCATCTTATCTCCGATTCGACTGGCGAGACCCTGATCGCCGCGGGACGTGC
GGCGGCCGCACAATTTCAATCCTCCCACGCGCTGGAACATGTCTACCCGCTGATCCGAAACCGGAAGCAGCTGATGCAGG
TCATGGAAGCGGTTGACGGCGCCCCGGGCATCGTCCTTTACACGATCGTCGACCGAGAGCTTGCCGGCCTCATCGATCAA
AGGTGCCGTGAGATCGGCGTCCCTTGCGTCTCGGTGCTCGACCCGATCATCGAGCTTTTTCAATCCTATCTCGGTTCGCC
TTCGCGCCGCCGCTCTGGCGCGCAGCACGTGATGGATGCCGAGTATTTTGCGCGCATAGAGGCTCTGAACTTCACGATGG
ATCATGACGACGGCCAGATCCCCGCCGATTTCGACGAGGCGGATGTGGTGCTCGTGGGCGTGAGCCGCACGTCGAAGACG
CCGACGAGCATCTATCTGGCCAATCGCGGCATAAAGACGGCCAATATCCCGATCGTGCCGGGCGTGTCCCTGCCGGAGGG
GCTGCTGACCGCGACGAAGCCGCTGATCGTCGGCCTCATTGCATCCGCCGAGCGGCTGTCCCAGGTGCGCCAGCACCGGG
TGCTCGGAACGACGCAGAGTTTCCACGGAGAAGATTATACGGACCGGGCTGCGATCGCCGAGGAGTTGAAATATGCCCGC
TCGCTATGCGCGCGCAACAACTGGCCGCTGATCGATGTGACGCGCCGTTCGATCGAAGAGACGGCCGCAGCGATCGTTGC
CCTGCGGCCGCGGCTCAGATAG

Upstream 100 bases:

>100_bases
GTCCGATTGTGAACAACTCGGCACTTTTCCACTTGCCTGATGGCAGGCGGCGCCGTTAGCTGTTTTTGTCCCGCCCTATC
AACAGACCGCGGAGAATTGC

Downstream 100 bases:

>100_bases
AGCGAAGCGGAAGGAATACAGCTCCAGGATTGCGGACAGAAACCGGAACGGAAAACATGAGACCCTCGCTCGTATTGGCA
TCGGCCAGTCCCTTCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPLIRNRKQLMQVMEAVDGAPGIVLYTIVDRELAGLIDQ
RCREIGVPCVSVLDPIIELFQSYLGSPSRRRSGAQHVMDAEYFARIEALNFTMDHDDGQIPADFDEADVVLVGVSRTSKT
PTSIYLANRGIKTANIPIVPGVSLPEGLLTATKPLIVGLIASAERLSQVRQHRVLGTTQSFHGEDYTDRAAIAEELKYAR
SLCARNNWPLIDVTRRSIEETAAAIVALRPRLR

Sequences:

>Translated_273_residues
MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPLIRNRKQLMQVMEAVDGAPGIVLYTIVDRELAGLIDQ
RCREIGVPCVSVLDPIIELFQSYLGSPSRRRSGAQHVMDAEYFARIEALNFTMDHDDGQIPADFDEADVVLVGVSRTSKT
PTSIYLANRGIKTANIPIVPGVSLPEGLLTATKPLIVGLIASAERLSQVRQHRVLGTTQSFHGEDYTDRAAIAEELKYAR
SLCARNNWPLIDVTRRSIEETAAAIVALRPRLR
>Mature_273_residues
MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPLIRNRKQLMQVMEAVDGAPGIVLYTIVDRELAGLIDQ
RCREIGVPCVSVLDPIIELFQSYLGSPSRRRSGAQHVMDAEYFARIEALNFTMDHDDGQIPADFDEADVVLVGVSRTSKT
PTSIYLANRGIKTANIPIVPGVSLPEGLLTATKPLIVGLIASAERLSQVRQHRVLGTTQSFHGEDYTDRAAIAEELKYAR
SLCARNNWPLIDVTRRSIEETAAAIVALRPRLR

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=275, Percent_Identity=31.6363636363636, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30170; Mature: 30170

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPLIRNRKQLMQVMEAVDG
CCCCCCEEEEEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
APGIVLYTIVDRELAGLIDQRCREIGVPCVSVLDPIIELFQSYLGSPSRRRSGAQHVMDA
CCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH
EYFARIEALNFTMDHDDGQIPADFDEADVVLVGVSRTSKTPTSIYLANRGIKTANIPIVP
HHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
GVSLPEGLLTATKPLIVGLIASAERLSQVRQHRVLGTTQSFHGEDYTDRAAIAEELKYAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
SLCARNNWPLIDVTRRSIEETAAAIVALRPRLR
HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENRKNYFHLHLISDSTGETLIAAGRAAAAQFQSSHALEHVYPLIRNRKQLMQVMEAVDG
CCCCCCEEEEEEEECCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
APGIVLYTIVDRELAGLIDQRCREIGVPCVSVLDPIIELFQSYLGSPSRRRSGAQHVMDA
CCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH
EYFARIEALNFTMDHDDGQIPADFDEADVVLVGVSRTSKTPTSIYLANRGIKTANIPIVP
HHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
GVSLPEGLLTATKPLIVGLIASAERLSQVRQHRVLGTTQSFHGEDYTDRAAIAEELKYAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
SLCARNNWPLIDVTRRSIEETAAAIVALRPRLR
HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]