Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150398300
Identifier: 150398300
GI number: 150398300
Start: 3252036
End: 3252521
Strand: Reverse
Name: 150398300
Synonym: Smed_3106
Alternate gene names: NA
Gene position: 3252521-3252036 (Counterclockwise)
Preceding gene: 150398305
Following gene: 150398299
Centisome position: 86.0
GC content: 67.7
Gene sequence:
>486_bases ATGGCAGACATGCTCGTCCGTCTCTATGCCTTGCCCGAGCGCGGCCCTTCCCGTCTTGCGCCCGACGTTCGCATCCGCCG GGCGCTGGCGGCCGAGCGGCGGGTCGTTATTGCCTGGATCGAGGAACGCTTCGGGGCCGGATGGGCCGGGGAGGCCGAAA CGGCCTTCTCCTCGACGCCGGCCCGGATCCATATCGCTCACGATCGGGACCGGATTTTGGGCTTCGCCTGCCACGATGTC ACCGCTCTCGGCTTCTTCGGTCCGACCGGAGTGGAAGCGGCGATGCGCGGCAAGGGCATAGGCGAGGCGCTGCTCATCGA AAGCCTGCTATCCATGCGCGCGGCCGGCTACGCCTATGCGATCATCGGCGGCGTCGGTCCCGCCACGTTCTATGCCCGCG CCGTCGGCGCGGTGGAGATCGCGGGTTCGACGCCGGGAATCTATGCCGGCATGCTCTTTCCCGGGGATTTAGCGTCCGGA ACCTGA
Upstream 100 bases:
>100_bases GCAGCGTTTCTGCAGAGACGTTTGCCGTCCGCGCCAGGCGCGCTATTAAAGGTCAAACCATTGCCGGCGCCTTTTGTTCG CCGAAAGCGGAGACACTTCC
Downstream 100 bases:
>100_bases TCCGTGCCCGCCGCGTTGGCAAAACAGCGGACGAGGCCCTTTTCCTTCACCGCTGCTTTGCGCTATGGGCTTAGCGATGA CCCGACCACCCTTCACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase Gnat Family
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MADMLVRLYALPERGPSRLAPDVRIRRALAAERRVVIAWIEERFGAGWAGEAETAFSSTPARIHIAHDRDRILGFACHDV TALGFFGPTGVEAAMRGKGIGEALLIESLLSMRAAGYAYAIIGGVGPATFYARAVGAVEIAGSTPGIYAGMLFPGDLASG T
Sequences:
>Translated_161_residues MADMLVRLYALPERGPSRLAPDVRIRRALAAERRVVIAWIEERFGAGWAGEAETAFSSTPARIHIAHDRDRILGFACHDV TALGFFGPTGVEAAMRGKGIGEALLIESLLSMRAAGYAYAIIGGVGPATFYARAVGAVEIAGSTPGIYAGMLFPGDLASG T >Mature_160_residues ADMLVRLYALPERGPSRLAPDVRIRRALAAERRVVIAWIEERFGAGWAGEAETAFSSTPARIHIAHDRDRILGFACHDVT ALGFFGPTGVEAAMRGKGIGEALLIESLLSMRAAGYAYAIIGGVGPATFYARAVGAVEIAGSTPGIYAGMLFPGDLASGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16935; Mature: 16804
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMLVRLYALPERGPSRLAPDVRIRRALAAERRVVIAWIEERFGAGWAGEAETAFSSTP CHHHHEEEHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCCCCCCC ARIHIAHDRDRILGFACHDVTALGFFGPTGVEAAMRGKGIGEALLIESLLSMRAAGYAYA CEEEEECCCCCEEEEEHHHHEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCEEEE IIGGVGPATFYARAVGAVEIAGSTPGIYAGMLFPGDLASGT EECCCCHHHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure ADMLVRLYALPERGPSRLAPDVRIRRALAAERRVVIAWIEERFGAGWAGEAETAFSSTP HHHHEEEHCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCCCCCCC ARIHIAHDRDRILGFACHDVTALGFFGPTGVEAAMRGKGIGEALLIESLLSMRAAGYAYA CEEEEECCCCCEEEEEHHHHEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCEEEE IIGGVGPATFYARAVGAVEIAGSTPGIYAGMLFPGDLASGT EECCCCHHHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA