| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396191
Identifier: 150396191
GI number: 150396191
Start: 1048100
End: 1048765
Strand: Direct
Name: 150396191
Synonym: Smed_0970
Alternate gene names: NA
Gene position: 1048100-1048765 (Clockwise)
Preceding gene: 150396190
Following gene: 150396192
Centisome position: 27.71
GC content: 62.46
Gene sequence:
>666_bases ATGAAAAAATGTGTTCTTGCGCGGCTTGCCGCGGCTGGCATCGTTTTGATTTGCACGGGGCAATCGCCGCAATTCGCATC GGCTGCCGATGACCGGCCGCTGATCTGGTCTCCCTCAAAGACCGGAGCCAACGCATATAAGCTCCGGCTTGGCGTTCGCC GGACGGGCCGGTGGAACACTTCCGCCGGTGCCGAGGTTGCGATGGGCGCTACCCGGACGGGCAAGATCAGCCCGCCCGGC GCACCGGTCCGTCTCTGGGGAATGGCTTCGCGCGAGAGCGGGCGAGGGGCGGTCAGGCGATCCTCACAAGTCAGCGTGGA CTACAATGCCTTGCGGGGCACCGGCAATTTCGGTGCCGGTACCGCCCGCAGCTGGATTGTCACTCCGACGCTCGATGCGG AGGTGCACAGGAGCATCGCGCTTCAGTGCAACGCTTACGAAAGCAGGTGCAGCGAACCGAAGCTGACCCAATCGGCCAAG CTGTTGTCTCCGGTGAGCCGAACATCGCTCACGGTGCAGAGCCAGGCTTCAAGCAGCGGTCTCAGCGGTGTTAGCCGGAT CGGCGTGGAACAGAATTTCGGCAATTTGCGTCTCGGCGCAGCCGTTGCCGACCCTTTGCTGGAGCCCCGAAGCGTTTTCG ACATCAGTTACAGTATGAGGTGGTGA
Upstream 100 bases:
>100_bases GGTTGACCGATTATCACGGGACCTTGCCGTCGGTCCGTGCTATCTTCCAGTCCTGACGATTTGCCTGATGGCAACGGTTG CGACCGAGGATCGGAATCCA
Downstream 100 bases:
>100_bases ACCGGCATCGGGGCCTGCTCGCTCGACACATCTTGCGCAAATGCACGAAAGACCGCTACGCAGTCTTTCTGAAAGCGCTC TATCTTTGCGGGGAGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW
Sequences:
>Translated_221_residues MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW >Mature_221_residues MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23440; Mature: 23440
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNT CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCC SAGAEVAMGATRTGKISPPGAPVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAG CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHEECCCCCCCC TARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAKLLSPVSRTSLTVQSQASSSG CCCCEEEECCCCHHHCEEEEEEEECHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC LSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW CCHHHHCCCCCCCCCEEECHHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNT CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCC SAGAEVAMGATRTGKISPPGAPVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAG CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHEECCCCCCCC TARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAKLLSPVSRTSLTVQSQASSSG CCCCEEEECCCCHHHCEEEEEEEECHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC LSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW CCHHHHCCCCCCCCCEEECHHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA