Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150396191

Identifier: 150396191

GI number: 150396191

Start: 1048100

End: 1048765

Strand: Direct

Name: 150396191

Synonym: Smed_0970

Alternate gene names: NA

Gene position: 1048100-1048765 (Clockwise)

Preceding gene: 150396190

Following gene: 150396192

Centisome position: 27.71

GC content: 62.46

Gene sequence:

>666_bases
ATGAAAAAATGTGTTCTTGCGCGGCTTGCCGCGGCTGGCATCGTTTTGATTTGCACGGGGCAATCGCCGCAATTCGCATC
GGCTGCCGATGACCGGCCGCTGATCTGGTCTCCCTCAAAGACCGGAGCCAACGCATATAAGCTCCGGCTTGGCGTTCGCC
GGACGGGCCGGTGGAACACTTCCGCCGGTGCCGAGGTTGCGATGGGCGCTACCCGGACGGGCAAGATCAGCCCGCCCGGC
GCACCGGTCCGTCTCTGGGGAATGGCTTCGCGCGAGAGCGGGCGAGGGGCGGTCAGGCGATCCTCACAAGTCAGCGTGGA
CTACAATGCCTTGCGGGGCACCGGCAATTTCGGTGCCGGTACCGCCCGCAGCTGGATTGTCACTCCGACGCTCGATGCGG
AGGTGCACAGGAGCATCGCGCTTCAGTGCAACGCTTACGAAAGCAGGTGCAGCGAACCGAAGCTGACCCAATCGGCCAAG
CTGTTGTCTCCGGTGAGCCGAACATCGCTCACGGTGCAGAGCCAGGCTTCAAGCAGCGGTCTCAGCGGTGTTAGCCGGAT
CGGCGTGGAACAGAATTTCGGCAATTTGCGTCTCGGCGCAGCCGTTGCCGACCCTTTGCTGGAGCCCCGAAGCGTTTTCG
ACATCAGTTACAGTATGAGGTGGTGA

Upstream 100 bases:

>100_bases
GGTTGACCGATTATCACGGGACCTTGCCGTCGGTCCGTGCTATCTTCCAGTCCTGACGATTTGCCTGATGGCAACGGTTG
CGACCGAGGATCGGAATCCA

Downstream 100 bases:

>100_bases
ACCGGCATCGGGGCCTGCTCGCTCGACACATCTTGCGCAAATGCACGAAAGACCGCTACGCAGTCTTTCTGAAAGCGCTC
TATCTTTGCGGGGAGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG
APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK
LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW

Sequences:

>Translated_221_residues
MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG
APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK
LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW
>Mature_221_residues
MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNTSAGAEVAMGATRTGKISPPG
APVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAGTARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAK
LLSPVSRTSLTVQSQASSSGLSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23440; Mature: 23440

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNT
CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCC
SAGAEVAMGATRTGKISPPGAPVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAG
CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHEECCCCCCCC
TARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAKLLSPVSRTSLTVQSQASSSG
CCCCEEEECCCCHHHCEEEEEEEECHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC
LSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW
CCHHHHCCCCCCCCCEEECHHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKCVLARLAAAGIVLICTGQSPQFASAADDRPLIWSPSKTGANAYKLRLGVRRTGRWNT
CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCC
SAGAEVAMGATRTGKISPPGAPVRLWGMASRESGRGAVRRSSQVSVDYNALRGTGNFGAG
CCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHEECCCCCCCC
TARSWIVTPTLDAEVHRSIALQCNAYESRCSEPKLTQSAKLLSPVSRTSLTVQSQASSSG
CCCCEEEECCCCHHHCEEEEEEEECHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC
LSGVSRIGVEQNFGNLRLGAAVADPLLEPRSVFDISYSMRW
CCHHHHCCCCCCCCCEEECHHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA