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The map label for this gene is yicC [C]

Identifier: 150395982

GI number: 150395982

Start: 814327

End: 815214

Strand: Direct

Name: yicC [C]

Synonym: Smed_0758

Alternate gene names: 150395982

Gene position: 814327-815214 (Clockwise)

Preceding gene: 150395981

Following gene: 150395983

Centisome position: 21.53

GC content: 62.95

Gene sequence:

>888_bases
ATGCCGCTCCAATCGATGACCGGCTTTGCCAGGAGTGAGGGGAGCAGCGGGCGCTATCGCTGGGCCTGGGAACTCCGCTC
CGTCAATGGCAAAGGGCTCGACATGCGCCTGCGGCTGCCGCCCGGGCTGGAGCGCTTCGAGCCCGACTGTCGACGCCTTG
CTTCGCAGCATTTCGCACGAGGCAACGTGCAGGTCGGCCTTTCGCTCAGCAGAACTGAAACCTCGGTCGAAGCCGTCGTC
AACGAGGACGCGCTTGCCGCCGTCCTGAAGCTTCGCGAACGGCTGGGCGATGCAATCGATCCGGCGCCGCTCAAACTCGA
CACGCTGCTTTCCATACGCGGCATCGTCGATTTCCGGGAACCGGAGGAGAGCGAAAGCGAGCGCGCCGAGCGTGACGCGG
AGGTACTCGCGGGCCTCGAAGGCGCGCTCGCAGATCTGCGGGCGATGCGGGAAGAAGAGGGCAAAGCGCTCGGCCAGGTT
TTGCTCGCCCAGGTGGATCGGATGGAAAAGCTGGCGGCAATCGTCGAAAACGATCCGTCCCGAAGCCCGAAGGCGATCGC
CGACAGGTTGGCGCAGCAGGTCTCGATGGTCATCGACAATGCATCCTCGATCGATCGGGAAAGGTTGCATGCGGAGGTAG
CGCTGCTGGCGACGAAGGCGGACCTTCGCGAGGAACTCGACCGGCTGAGCTCGCATATCGCTGCCGCTCGCGACCTCCTG
ACAAAGGGTGGGCCCGTCGGGCGCAAGCTCGATTTCCTTGCACAGGAATTTAACCGCGAATCGAATACCATCTGTTCGAA
GTCGAATGCCGCCGCCGTCTCGGCCGCCGGTATCGAGTTGAAGGTCGTAATCGACCATTTCCGCGAACAGGTTCAGAATC
TGGAGTAG

Upstream 100 bases:

>100_bases
GCGGAGTTCCCCGCTGTGGCCATAGTGCTTCCCGCAACAACGGCGGGCCTCCCCTCGGGGTACCTGGACCGTTGTGATTT
TTGGATCACCGGAGGACAGG

Downstream 100 bases:

>100_bases
GATATGAAACCGGCGACCGTTTCGCCCACAAAGATCGCTCGCCGCGGGCTGATGCTCGTGATCTCATCGCCGTCAGGTGC
GGGGAAGTCGACGATCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPLQSMTGFARSEGSSGRYRWAWELRSVNGKGLDMRLRLPPGLERFEPDCRRLASQHFARGNVQVGLSLSRTETSVEAVV
NEDALAAVLKLRERLGDAIDPAPLKLDTLLSIRGIVDFREPEESESERAERDAEVLAGLEGALADLRAMREEEGKALGQV
LLAQVDRMEKLAAIVENDPSRSPKAIADRLAQQVSMVIDNASSIDRERLHAEVALLATKADLREELDRLSSHIAAARDLL
TKGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDHFREQVQNLE

Sequences:

>Translated_295_residues
MPLQSMTGFARSEGSSGRYRWAWELRSVNGKGLDMRLRLPPGLERFEPDCRRLASQHFARGNVQVGLSLSRTETSVEAVV
NEDALAAVLKLRERLGDAIDPAPLKLDTLLSIRGIVDFREPEESESERAERDAEVLAGLEGALADLRAMREEEGKALGQV
LLAQVDRMEKLAAIVENDPSRSPKAIADRLAQQVSMVIDNASSIDRERLHAEVALLATKADLREELDRLSSHIAAARDLL
TKGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDHFREQVQNLE
>Mature_294_residues
PLQSMTGFARSEGSSGRYRWAWELRSVNGKGLDMRLRLPPGLERFEPDCRRLASQHFARGNVQVGLSLSRTETSVEAVVN
EDALAAVLKLRERLGDAIDPAPLKLDTLLSIRGIVDFREPEESESERAERDAEVLAGLEGALADLRAMREEEGKALGQVL
LAQVDRMEKLAAIVENDPSRSPKAIADRLAQQVSMVIDNASSIDRERLHAEVALLATKADLREELDRLSSHIAAARDLLT
KGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDHFREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=300, Percent_Identity=35.6666666666667, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32456; Mature: 32325

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQSMTGFARSEGSSGRYRWAWELRSVNGKGLDMRLRLPPGLERFEPDCRRLASQHFAR
CCCCHHCCHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHCC
GNVQVGLSLSRTETSVEAVVNEDALAAVLKLRERLGDAIDPAPLKLDTLLSIRGIVDFRE
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
PEESESERAERDAEVLAGLEGALADLRAMREEEGKALGQVLLAQVDRMEKLAAIVENDPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSPKAIADRLAQQVSMVIDNASSIDRERLHAEVALLATKADLREELDRLSSHIAAARDLL
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDHFREQVQNLE
HCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLQSMTGFARSEGSSGRYRWAWELRSVNGKGLDMRLRLPPGLERFEPDCRRLASQHFAR
CCCHHCCHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHCC
GNVQVGLSLSRTETSVEAVVNEDALAAVLKLRERLGDAIDPAPLKLDTLLSIRGIVDFRE
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
PEESESERAERDAEVLAGLEGALADLRAMREEEGKALGQVLLAQVDRMEKLAAIVENDPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSPKAIADRLAQQVSMVIDNASSIDRERLHAEVALLATKADLREELDRLSSHIAAARDLL
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDHFREQVQNLE
HCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]