| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150395966
Identifier: 150395966
GI number: 150395966
Start: 796066
End: 796398
Strand: Direct
Name: 150395966
Synonym: Smed_0742
Alternate gene names: NA
Gene position: 796066-796398 (Clockwise)
Preceding gene: 150395961
Following gene: 150395968
Centisome position: 21.05
GC content: 61.86
Gene sequence:
>333_bases ATGGCCCACTTCGATCCGAAGATGCAGGAATGCATCGAGAATTGCCTCGCCTGCTACCGCGTCTGCCTCTCGACGGCGAT GAGCCATTGCCTCGAAGCCGGCGGCGAGCATACGAAGCCGCCGCACTTCCGCCTGATGATGGCTTGTGCGGAAATCTGCA GGGACGCGGCGCACTTCATGCTGCTAGGCACACCTCACCATAAGCATCTATGCGGCGAATGCGCCGAGATCTGTGCTGAA TGCGCACAGGACTGCGAGCGCATCGGCGACATGGCCGACTGCGTCGATGCTTGCAGGCGCTGTGCCGAAAGCTGCCGCCA GATGGCGGCATGA
Upstream 100 bases:
>100_bases TGCAAGCAGCTCGCGCCAGATTAACGCTTCGGCTGTGTTCCGCCGGAACAAAACCGACTCTGCGCTGTTGAGTGAGCTTC CATCCATTCGGGAGAAGACT
Downstream 100 bases:
>100_bases GACTGCAGTCCCGGTGGGAGCATATTTCAGATCGGCGCGGGATAAAGCCGATGCAGGCGCCGGATGCCGTTCATCACGTC TTGGGAGAGCTCGACGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFMLLGTPHHKHLCGECAEICAE CAQDCERIGDMADCVDACRRCAESCRQMAA
Sequences:
>Translated_110_residues MAHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFMLLGTPHHKHLCGECAEICAE CAQDCERIGDMADCVDACRRCAESCRQMAA >Mature_109_residues AHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFMLLGTPHHKHLCGECAEICAEC AQDCERIGDMADCVDACRRCAESCRQMAA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12196; Mature: 12065
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.5 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 21.8 %Cys+Met (Translated Protein) 14.7 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 21.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLGTPHHKHLCGECAEICAECAQDCERIGDMADCVDACRRCAESCRQMAA HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLGTPHHKHLCGECAEICAECAQDCERIGDMADCVDACRRCAESCRQMAA HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA