Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395957
Identifier: 150395957
GI number: 150395957
Start: 787841
End: 788143
Strand: Direct
Name: 150395957
Synonym: Smed_0733
Alternate gene names: NA
Gene position: 787841-788143 (Clockwise)
Preceding gene: 150395956
Following gene: 150395959
Centisome position: 20.83
GC content: 67.99
Gene sequence:
>303_bases GTGACGCTCGATCCGCATACGCTTCTTGCGATTGTCACCATGGCCGCTGCCACGATACTGACCCGGCTCGGCGGTCTTGT CCTCATCCGATTCGTGACGATCGGCCCGAAACAGAAACGGGCCCTCGAGGCGATCCCGCCGGCGGTGCTGATGGCCGTCA TCGCTCCGACAGCGCTGGTCACCGGGCCGGCCGAAACGCTCGCGGCGCTCGCGACAGCGCTCGTCGCTATGCGGCTGCCG CTGCTTGCGGCGGTGGCGACCGGGGTGATGGTGGTCGCGCTTGCGAGGATGTTCGGGGCGTGA
Upstream 100 bases:
>100_bases TCGCGCACCAGTTCCTCCCCGGAGTCTGGTACATCGCCGCCGGCGCGGCCGCGGGCGTCATTGCGGCGCTTTTCACCGGG GAACGCCAGGAGGCCTGCGC
Downstream 100 bases:
>100_bases GGGCGGACCCCTACGACAATCGCCTCAATGCTCGTATTGCGTGAACGAAGGATCGGCGAGGTCGGAGAAGCGCGTGAACT CGGACTGGAAGGCGAGCTTG
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALVTGPAETLAALATALVAMRLP LLAAVATGVMVVALARMFGA
Sequences:
>Translated_100_residues MTLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALVTGPAETLAALATALVAMRLP LLAAVATGVMVVALARMFGA >Mature_99_residues TLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALVTGPAETLAALATALVAMRLPL LAAVATGVMVVALARMFGA
Specific function: Unknown
COG id: COG4541
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10167; Mature: 10036
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TGPAETLAALATALVAMRLPLLAAVATGVMVVALARMFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TGPAETLAALATALVAMRLPLLAAVATGVMVVALARMFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA