| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is acpS [H]
Identifier: 150395904
GI number: 150395904
Start: 732250
End: 732669
Strand: Direct
Name: acpS [H]
Synonym: Smed_0680
Alternate gene names: 150395904
Gene position: 732250-732669 (Clockwise)
Preceding gene: 150395903
Following gene: 150395905
Centisome position: 19.36
GC content: 62.38
Gene sequence:
>420_bases ATGATCATCGGCATAGGCAGCGATCTCATCGATATCAGACGCATCGAAAATTCGCTCCAGCGCTTCGGCGAGCGTTTCGT AAACCGGTGTTTCACCGACATCGAGATCGCCAAATCCGACGGCCGCAAGAACCGCGCGGCGTCCTATGCCAAGCGCTTCG CCGCCAAGGAGGCCTGCTCCAAGGCACTCGGCACCGGCTTAGCGCAGGGCGTATTCTGGAAAGAAATGGGGGTCGTCAAC CTGCCCGGCGGGAAGCCGACGATGCAACTGACCGGCGGCGCGGCAGCGCGCCTTCGGGAAATGTTGCCGGTCGGACACCG CGCCGCGATCCATCTGACGATCACCGACGACTTCCCGCTTGCGCAAGCTTTCGTGATTATCGAGGCGCTGCCGGTTGCCC CCGCCGAGGGAACGGTTTAG
Upstream 100 bases:
>100_bases CGGCGGGTGGCCTGATATTCTACCCGCTTGCCTTTCAGACGGCGCGTCTCTTTCAGGAGCGCCGCCGGCGGGCCCGCGCG CACAGACTTGGACATCCAAC
Downstream 100 bases:
>100_bases AGCACTTGCCGAAAGACCGGCCCGCGGTCGCTTGAAGCTCGGATTTCCCGCGACATATAGCATCGAGTTGCGGGGAGACG TGCGGCATGAGTTCGGGCGC
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MIIGIGSDLIDIRRIENSLQRFGERFVNRCFTDIEIAKSDGRKNRAASYAKRFAAKEACSKALGTGLAQGVFWKEMGVVN LPGGKPTMQLTGGAAARLREMLPVGHRAAIHLTITDDFPLAQAFVIIEALPVAPAEGTV
Sequences:
>Translated_139_residues MIIGIGSDLIDIRRIENSLQRFGERFVNRCFTDIEIAKSDGRKNRAASYAKRFAAKEACSKALGTGLAQGVFWKEMGVVN LPGGKPTMQLTGGAAARLREMLPVGHRAAIHLTITDDFPLAQAFVIIEALPVAPAEGTV >Mature_139_residues MIIGIGSDLIDIRRIENSLQRFGERFVNRCFTDIEIAKSDGRKNRAASYAKRFAAKEACSKALGTGLAQGVFWKEMGVVN LPGGKPTMQLTGGAAARLREMLPVGHRAAIHLTITDDFPLAQAFVIIEALPVAPAEGTV
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]
Homologues:
Organism=Escherichia coli, GI1788916, Length=128, Percent_Identity=39.84375, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: =2.7.8.7 [H]
Molecular weight: Translated: 14982; Mature: 14982
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGIGSDLIDIRRIENSLQRFGERFVNRCFTDIEIAKSDGRKNRAASYAKRFAAKEACS CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH KALGTGLAQGVFWKEMGVVNLPGGKPTMQLTGGAAARLREMLPVGHRAAIHLTITDDFPL HHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCH AQAFVIIEALPVAPAEGTV HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIIGIGSDLIDIRRIENSLQRFGERFVNRCFTDIEIAKSDGRKNRAASYAKRFAAKEACS CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH KALGTGLAQGVFWKEMGVVNLPGGKPTMQLTGGAAARLREMLPVGHRAAIHLTITDDFPL HHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCH AQAFVIIEALPVAPAEGTV HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]