Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is yfcG [H]
Identifier: 150395886
GI number: 150395886
Start: 713791
End: 714492
Strand: Direct
Name: yfcG [H]
Synonym: Smed_0662
Alternate gene names: 150395886
Gene position: 713791-714492 (Clockwise)
Preceding gene: 150395881
Following gene: 150395888
Centisome position: 18.87
GC content: 59.4
Gene sequence:
>702_bases ATGACCGCTCCGATCGAGCTCTATTATTGGCCCACGCCGAACGGCTGGAAGATCACCATAATGCTGGAGGAGCTCGGCGT TCCCTACGTCGTCAAATACATCAATATCGGCCGGGGAGATCAGTTCCAACCAGACTTCCTGAAGATCTCGCCCAACAACC GGATGCCGGCGATCGTCGACCCGGACGGCCCGGGGGGCGAGCCCATCTCCGTATTCGAATCAGGTGCAATCCTGCAGTAT CTGGGCCGCAAATACGGCAAGTTCTATCCGACTGACGAGCGCGCCCGTGTCGACGTGGAGCAATGGCTGTTCTGGCAGGT GGGAGGGCTCGGCCCGATGGCCGGACAAGCGCATCATTTCCGCCAATATGCCCCGGAAAGGATCGCCTACGGCATAGACC GCTATACCAATGAAGTGAACCGCCTCTACGGCGTGATGAACAAGAGACTTGCCGACCGGCCGTTCCTCGCAGGCGATTAC TCGATCGCCGACATGGCCGCAGTCGGCTGGGCGATCCCGCATGAAAACCAGGGACAGGACCTGAACGAGTTTCCTAATCT GAAGCGCTGGTACGACGCCATGCTTGGGCGTCCAGCGGTGAAGAAGGCAATCGAAGTCGGCAAGGAGGAACGGGCTCGCC AGAAAAGCCTTGCCGAGGATCAAGAGGCACAAAAGGTCCTGTTCGGACAACGCGCCCGCTGA
Upstream 100 bases:
>100_bases AGTAAAGGCATGCACATAAACATGTCCATGGGGTTGGCGGACTTGCCGTGGAGCGGCCGTGTTCCTAAGTCAGGCTTTCC GACAACCAGGAGAGAACGCG
Downstream 100 bases:
>100_bases GGCGTGCGCCGCCGCCTGCATCGCGCTCCCATCGGCTCGACTCAGTCACTTTCACGATTTCAGGTCGATGCGACCTGAAA TCATTGCGGTCTAAAGGCGT
Product: glutathione S-transferase domain-containing protein
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTAPIELYYWPTPNGWKITIMLEELGVPYVVKYINIGRGDQFQPDFLKISPNNRMPAIVDPDGPGGEPISVFESGAILQY LGRKYGKFYPTDERARVDVEQWLFWQVGGLGPMAGQAHHFRQYAPERIAYGIDRYTNEVNRLYGVMNKRLADRPFLAGDY SIADMAAVGWAIPHENQGQDLNEFPNLKRWYDAMLGRPAVKKAIEVGKEERARQKSLAEDQEAQKVLFGQRAR
Sequences:
>Translated_233_residues MTAPIELYYWPTPNGWKITIMLEELGVPYVVKYINIGRGDQFQPDFLKISPNNRMPAIVDPDGPGGEPISVFESGAILQY LGRKYGKFYPTDERARVDVEQWLFWQVGGLGPMAGQAHHFRQYAPERIAYGIDRYTNEVNRLYGVMNKRLADRPFLAGDY SIADMAAVGWAIPHENQGQDLNEFPNLKRWYDAMLGRPAVKKAIEVGKEERARQKSLAEDQEAQKVLFGQRAR >Mature_232_residues TAPIELYYWPTPNGWKITIMLEELGVPYVVKYINIGRGDQFQPDFLKISPNNRMPAIVDPDGPGGEPISVFESGAILQYL GRKYGKFYPTDERARVDVEQWLFWQVGGLGPMAGQAHHFRQYAPERIAYGIDRYTNEVNRLYGVMNKRLADRPFLAGDYS IADMAAVGWAIPHENQGQDLNEFPNLKRWYDAMLGRPAVKKAIEVGKEERARQKSLAEDQEAQKVLFGQRAR
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=202, Percent_Identity=51.980198019802, Blast_Score=209, Evalue=1e-55, Organism=Escherichia coli, GI87082195, Length=235, Percent_Identity=39.5744680851064, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI87081789, Length=177, Percent_Identity=27.683615819209, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324100, Length=245, Percent_Identity=33.8775510204082, Blast_Score=132, Evalue=6e-32, Organism=Drosophila melanogaster, GI17933730, Length=227, Percent_Identity=29.5154185022026, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI28571670, Length=172, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI45549270, Length=194, Percent_Identity=30.4123711340206, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864592, Length=195, Percent_Identity=29.2307692307692, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864598, Length=194, Percent_Identity=31.4432989690722, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI221378983, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646259, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17864594, Length=196, Percent_Identity=28.0612244897959, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85725204, Length=198, Percent_Identity=26.7676767676768, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737923, Length=198, Percent_Identity=26.7676767676768, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864596, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646249, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24646251, Length=179, Percent_Identity=26.2569832402235, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 26596; Mature: 26464
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPIELYYWPTPNGWKITIMLEELGVPYVVKYINIGRGDQFQPDFLKISPNNRMPAIVD CCCCEEEEEECCCCCEEEEEEHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEC PDGPGGEPISVFESGAILQYLGRKYGKFYPTDERARVDVEQWLFWQVGGLGPMAGQAHHF CCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHH RQYAPERIAYGIDRYTNEVNRLYGVMNKRLADRPFLAGDYSIADMAAVGWAIPHENQGQD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC LNEFPNLKRWYDAMLGRPAVKKAIEVGKEERARQKSLAEDQEAQKVLFGQRAR HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAPIELYYWPTPNGWKITIMLEELGVPYVVKYINIGRGDQFQPDFLKISPNNRMPAIVD CCCEEEEEECCCCCEEEEEEHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEC PDGPGGEPISVFESGAILQYLGRKYGKFYPTDERARVDVEQWLFWQVGGLGPMAGQAHHF CCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHH RQYAPERIAYGIDRYTNEVNRLYGVMNKRLADRPFLAGDYSIADMAAVGWAIPHENQGQD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC LNEFPNLKRWYDAMLGRPAVKKAIEVGKEERARQKSLAEDQEAQKVLFGQRAR HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]