Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395881
Identifier: 150395881
GI number: 150395881
Start: 710109
End: 711059
Strand: Direct
Name: 150395881
Synonym: Smed_0657
Alternate gene names: NA
Gene position: 710109-711059 (Clockwise)
Preceding gene: 150395878
Following gene: 150395886
Centisome position: 18.78
GC content: 63.3
Gene sequence:
>951_bases ATGAATACAAATGGGGAGCGCCGCCGGCAGTCGTGGCTTGCGCGCAACCGTCTGGCGCTGTTCTCTGCGGCGGCAATCGC AACTTATGGCATATTCGTCGGATGGGTCTGGGGCTGGCCGTTTCTGTTACTGCAATGGGCCGAAATCGGAATTGGGCCGG TAATCTCGGCGCTGGCGCTTCTCGTCGCAACCTATTTCATCCGCTGCTATCGCATCCACGACTACTTCCCGGGCGAGACG AGGGGACGGTTTCTAACGCTCTTCCGTGTGACTCAGGTTCACAATCTCCTCAATATAATGCTGCCGTTCAGGGCCGGCGA AACGAGCTTTCCCTTGCTCATGCGCAGCGAATTCGGCGTGGCGTTGGTACGCGGCACCTCGGCGCTGCTCGTCATGCGGC TTCTGGACCTGCACGCTTTGCTTACCGTTGCGTCGGTAGGCCTGGTGACCGGCCATGGCGCTGCCGGCTGGCTCTTATGG CTGTTCGTGGTTCTCTCGCCCCTTGCCTTCTTTGTTCTGAAGGAACAAGCGCTCAAGGTGATGCGCCGTTTTGCGCCGGA AAGGGCCGGTCCGCTCCTGGACGAGGTGGAGACGGGACTGCCGACCGACATTCACGCGTTCTTGCGTGCCTGGGCGATGA CGATGCTGAACTGGGCGGTGAAGGTGGTCGTTCTTGCCTGGGTCCTTGCCATCATGGGTGTGGCGCCGCTCGCCGCCTCG TTCGGCGGCGCGCTCGGCGGCGAATTGTCTTCGGTTCTTCCCGTGCACGCGCCTGCGGGCGTAGGAACCTACGCGGCGGC GATCGTCGCCGGCGCCGTTTCCTTCGGAGCGGCGACGAACCAGGCGACGCTGGAGATGCTCGGCCGTGCCAGCATCAATG CCCACCTGCTGGTCATCGTGTCGGCGGTGGCGGGCACGCTGCTGTCGCTCCTCCTGCGGCCGAAGGCGTGA
Upstream 100 bases:
>100_bases ATTCAAGGGCCAGATTCCGGTGTGCTCGGAGGCTTTCTTGCATACTTATGAAATTATAAGCAATGTCGAATCGCATTGCT GGATACAGGAAAAAGTAGTG
Downstream 100 bases:
>100_bases CAGGGTGACACGAAATGCCGGCTACAGAGCAAATCCGCGTTTCTCGGATTCGCGGATTTCTCCGAAATCCAGGACGGAGA ATCGCCGCCACTTCCTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNTNGERRRQSWLARNRLALFSAAAIATYGIFVGWVWGWPFLLLQWAEIGIGPVISALALLVATYFIRCYRIHDYFPGET RGRFLTLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVALVRGTSALLVMRLLDLHALLTVASVGLVTGHGAAGWLLW LFVVLSPLAFFVLKEQALKVMRRFAPERAGPLLDEVETGLPTDIHAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAAS FGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGAATNQATLEMLGRASINAHLLVIVSAVAGTLLSLLLRPKA
Sequences:
>Translated_316_residues MNTNGERRRQSWLARNRLALFSAAAIATYGIFVGWVWGWPFLLLQWAEIGIGPVISALALLVATYFIRCYRIHDYFPGET RGRFLTLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVALVRGTSALLVMRLLDLHALLTVASVGLVTGHGAAGWLLW LFVVLSPLAFFVLKEQALKVMRRFAPERAGPLLDEVETGLPTDIHAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAAS FGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGAATNQATLEMLGRASINAHLLVIVSAVAGTLLSLLLRPKA >Mature_316_residues MNTNGERRRQSWLARNRLALFSAAAIATYGIFVGWVWGWPFLLLQWAEIGIGPVISALALLVATYFIRCYRIHDYFPGET RGRFLTLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVALVRGTSALLVMRLLDLHALLTVASVGLVTGHGAAGWLLW LFVVLSPLAFFVLKEQALKVMRRFAPERAGPLLDEVETGLPTDIHAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAAS FGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGAATNQATLEMLGRASINAHLLVIVSAVAGTLLSLLLRPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34096; Mature: 34096
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNGERRRQSWLARNRLALFSAAAIATYGIFVGWVWGWPFLLLQWAEIGIGPVISALAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LVATYFIRCYRIHDYFPGETRGRFLTLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCE ALVRGTSALLVMRLLDLHALLTVASVGLVTGHGAAGWLLWLFVVLSPLAFFVLKEQALKV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MRRFAPERAGPLLDEVETGLPTDIHAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAAS HHHHCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGAATNQATLEMLGRASINAHLLVIV HCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH SAVAGTLLSLLLRPKA HHHHHHHHHHHHCCCC >Mature Secondary Structure MNTNGERRRQSWLARNRLALFSAAAIATYGIFVGWVWGWPFLLLQWAEIGIGPVISALAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LVATYFIRCYRIHDYFPGETRGRFLTLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCE ALVRGTSALLVMRLLDLHALLTVASVGLVTGHGAAGWLLWLFVVLSPLAFFVLKEQALKV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MRRFAPERAGPLLDEVETGLPTDIHAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAAS HHHHCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGAATNQATLEMLGRASINAHLLVIV HCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH SAVAGTLLSLLLRPKA HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA