| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395825
Identifier: 150395825
GI number: 150395825
Start: 651566
End: 651841
Strand: Direct
Name: 150395825
Synonym: Smed_0601
Alternate gene names: NA
Gene position: 651566-651841 (Clockwise)
Preceding gene: 150395818
Following gene: 150395827
Centisome position: 17.23
GC content: 61.23
Gene sequence:
>276_bases ATGTCTGAAGATATGATGAGTCCGCTCTACGCCGTGCGCAGCCGCAAGTTGCCGCCCACCGCGGTGCCATACGTCTTCGC GTTTTTCATGTCGGCGATCATGGCTTTGCTGATGTGCAGCGTGATCGTTGCCGCAAACAGCGGTGTCGATCAGGGCTATC CGGCACGCGTGGTCGGGGCATACGCCTTCGCCATGCCGGTCGCCTTCGTCTGCGTCCTGATCGTCCGTCCGCTCGTGATG CGGCTCGTCTCGATGGTATGCCGAATGCCGGGTTGA
Upstream 100 bases:
>100_bases CTTAGTTCTGAACGAGCATGCAAGGGGCTACCGGAACATCTCCCGTCCGTATAGGTGAGGCGATCCGGTGGAACTCCGCC GCGGTCACCAGGAGATTTCG
Downstream 100 bases:
>100_bases GCCGGACGCTGGCGAGGTTCCTTCGGCCCCTTGCGGGACTAGCCTTCCAGATTGAGCCCGATGCCCCACGGATCGATGAG GCTGTAGGCGCTGCCGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSEDMMSPLYAVRSRKLPPTAVPYVFAFFMSAIMALLMCSVIVAANSGVDQGYPARVVGAYAFAMPVAFVCVLIVRPLVM RLVSMVCRMPG
Sequences:
>Translated_91_residues MSEDMMSPLYAVRSRKLPPTAVPYVFAFFMSAIMALLMCSVIVAANSGVDQGYPARVVGAYAFAMPVAFVCVLIVRPLVM RLVSMVCRMPG >Mature_90_residues SEDMMSPLYAVRSRKLPPTAVPYVFAFFMSAIMALLMCSVIVAANSGVDQGYPARVVGAYAFAMPVAFVCVLIVRPLVMR LVSMVCRMPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9882; Mature: 9751
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 11.0 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 13.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDMMSPLYAVRSRKLPPTAVPYVFAFFMSAIMALLMCSVIVAANSGVDQGYPARVVGA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH YAFAMPVAFVCVLIVRPLVMRLVSMVCRMPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEDMMSPLYAVRSRKLPPTAVPYVFAFFMSAIMALLMCSVIVAANSGVDQGYPARVVGA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH YAFAMPVAFVCVLIVRPLVMRLVSMVCRMPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA