Click here to switch to the map view.

The map label for this gene is 150395761

Identifier: 150395761

GI number: 150395761

Start: 580800

End: 581339

Strand: Direct

Name: 150395761

Synonym: Smed_0537

Alternate gene names: NA

Gene position: 580800-581339 (Clockwise)

Preceding gene: 150395756

Following gene: 150395765

Centisome position: 15.36

GC content: 64.07

Gene sequence:

>540_bases
GTGTCTGGCAAAGTAACTCGCCGTGTTCTCGCAGTTTCCCTCCTTTTGGCCGCTGCAGGCTGTAACAAGACGCAGACGGG
TGGCGCCATCGACGCCGGCGGAAGCGCGGCGGCGCCCACGCCTGCGGTGATACAGGCGGCCTGCCCGCCGATCAGCCTCC
GGGATGGTACCTCGTCCTACCGTACCTATGCGAAGGGTGCCAAAGACGATCCGAGCAAGATCGTCTACCAGGCCTCGCTT
GCCAATTCGACGCGCCAGTGCGTGCAGAGCGCGGACAAGCTGACGATGACGGTCGTCGTTCAGGGGCGTGTCGTCGCCGG
TCCCGCCGGTGGGCCGGGTAAGGTGACCCTGCCGATCCGAGTCGCCGCCACGGATGGCGACACGACGCTTTATTCGGAAC
TGACCCAATTCCCGGTCGAAGTGCCGGCAGGCACCACCCAATTCGTCTTTACGAAGGCCGATGTAACGCTACCGGCCGGT
GCCGGCGCCGAGGCGAAGGTCTTCGTCGGTTTCGATGAAGGTCCGTATCGGACGAAGTAA

Upstream 100 bases:

>100_bases
AGGCTCTCGCCTGTTGAAGCCGACCGCGGCGGATGTGGCTTGCTCCAAGCCGAAGCCATCGCGGTCCGGAAATTCATCCG
TTCAGTAGAGGTTGTGCAAC

Downstream 100 bases:

>100_bases
TGAAGAAGCTGGCGCGAGGCTTGCTCCTCTCACTCTTCTCGAGCGGGGAGAAGGTGGCCGCCAGGCCGGAGGAGCGGAAA
GTTCGCCGGGATCATCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSGKVTRRVLAVSLLLAAAGCNKTQTGGAIDAGGSAAAPTPAVIQAACPPISLRDGTSSYRTYAKGAKDDPSKIVYQASL
ANSTRQCVQSADKLTMTVVVQGRVVAGPAGGPGKVTLPIRVAATDGDTTLYSELTQFPVEVPAGTTQFVFTKADVTLPAG
AGAEAKVFVGFDEGPYRTK

Sequences:

>Translated_179_residues
MSGKVTRRVLAVSLLLAAAGCNKTQTGGAIDAGGSAAAPTPAVIQAACPPISLRDGTSSYRTYAKGAKDDPSKIVYQASL
ANSTRQCVQSADKLTMTVVVQGRVVAGPAGGPGKVTLPIRVAATDGDTTLYSELTQFPVEVPAGTTQFVFTKADVTLPAG
AGAEAKVFVGFDEGPYRTK
>Mature_178_residues
SGKVTRRVLAVSLLLAAAGCNKTQTGGAIDAGGSAAAPTPAVIQAACPPISLRDGTSSYRTYAKGAKDDPSKIVYQASLA
NSTRQCVQSADKLTMTVVVQGRVVAGPAGGPGKVTLPIRVAATDGDTTLYSELTQFPVEVPAGTTQFVFTKADVTLPAGA
GAEAKVFVGFDEGPYRTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18220; Mature: 18089

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKVTRRVLAVSLLLAAAGCNKTQTGGAIDAGGSAAAPTPAVIQAACPPISLRDGTSSY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCEECCCCHHH
RTYAKGAKDDPSKIVYQASLANSTRQCVQSADKLTMTVVVQGRVVAGPAGGPGKVTLPIR
HHHHCCCCCCCHHEEEEEHHHHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEEEEE
VAATDGDTTLYSELTQFPVEVPAGTTQFVFTKADVTLPAGAGAEAKVFVGFDEGPYRTK
EEECCCCHHHHHHHHHCCEECCCCCEEEEEEECCEEECCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
SGKVTRRVLAVSLLLAAAGCNKTQTGGAIDAGGSAAAPTPAVIQAACPPISLRDGTSSY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCEECCCCHHH
RTYAKGAKDDPSKIVYQASLANSTRQCVQSADKLTMTVVVQGRVVAGPAGGPGKVTLPIR
HHHHCCCCCCCHHEEEEEHHHHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEEEEE
VAATDGDTTLYSELTQFPVEVPAGTTQFVFTKADVTLPAGAGAEAKVFVGFDEGPYRTK
EEECCCCHHHHHHHHHCCEECCCCCEEEEEEECCEEECCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA