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The map label for this gene is 150395750

Identifier: 150395750

GI number: 150395750

Start: 568110

End: 568853

Strand: Direct

Name: 150395750

Synonym: Smed_0526

Alternate gene names: NA

Gene position: 568110-568853 (Clockwise)

Preceding gene: 150395749

Following gene: 150395751

Centisome position: 15.02

GC content: 62.9

Gene sequence:

>744_bases
GTGGCTGACGGTCACATGCCGGCCTTTCGCAGGCTCTTTGGTCGCGTCGCGGGCGTTGTCCTGGTGCTCGCCGCTCTCGC
CGTGCTCGTGGCGCTCGGTACGTGGCAGATGCAAAGGCTGCAGTGGAAAGAAGCGCTGATCGGCGCAATTGCCGAGCGCC
GATCAGCGCCGGCCGTTCCACTCGAGCAGATCGAGGCCATGGCCGCTGCAGGAGGGGATATCGACTATCGGACGGTGCAC
GCGTCCGGCATATATGACCACGGCAGAGAGCGCCATTTCTTCGCAACCCATGAAGGCCGCACCGGTTTCTATGTCTTCAC
GCCTCTGATGCTGGCCGACGCGCGCGCTCTCTTCGTGAACCGCGGTTTCGTCCCGTTCGAGAAGAAGGACTCGTCCAAGC
GCAGCGAAGGGCTGGTCGCCGGAAAAGTTACCGTCAACGGTTTGGCGCGGCCGAAGCTTTCCGGGAAGCCATCGTCGCTG
GTGCCGGACAATGACCCTGCCAAGAATATCTTCTACTGGAAGGATCTAGGTGCGATGGCGAACTCCACCGGGATTTCCAG
CGATCGCGTCGTTCCCTTCTTCATCGATGCCGACGCCGCGCCGAATCCAGGCGGCCTGCCCGTCGGCGGCGTGACGCAGT
TCGATCTGCCGAACAATCACCTGCAATATGCGCTGACCTGGTACGGCCTTGCCGCGGCGCTCGTTGCTGTCAGCGGCGTA
TTTGTCTACCGGCGCAGGCGGTAG

Upstream 100 bases:

>100_bases
CCGCTTGCGACGGTTTTAAGCCTGGCCCTGACGCGTATGCTGAAGGGCGTTCTCATCAATCTGCAATACCGCAACAATGC
GCGCCCCGGTGAAATCGACC

Downstream 100 bases:

>100_bases
GATGCGGCGGTTCTTCCTTGTGTGCCCGGTCGTTGCCGCTATATATGGCGCATACCGAAATCCGGCTTTGTTCGTTCCCT
TGGCGTTTTCATGATGGCCT

Product: Surfeit locus 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MADGHMPAFRRLFGRVAGVVLVLAALAVLVALGTWQMQRLQWKEALIGAIAERRSAPAVPLEQIEAMAAAGGDIDYRTVH
ASGIYDHGRERHFFATHEGRTGFYVFTPLMLADARALFVNRGFVPFEKKDSSKRSEGLVAGKVTVNGLARPKLSGKPSSL
VPDNDPAKNIFYWKDLGAMANSTGISSDRVVPFFIDADAAPNPGGLPVGGVTQFDLPNNHLQYALTWYGLAAALVAVSGV
FVYRRRR

Sequences:

>Translated_247_residues
MADGHMPAFRRLFGRVAGVVLVLAALAVLVALGTWQMQRLQWKEALIGAIAERRSAPAVPLEQIEAMAAAGGDIDYRTVH
ASGIYDHGRERHFFATHEGRTGFYVFTPLMLADARALFVNRGFVPFEKKDSSKRSEGLVAGKVTVNGLARPKLSGKPSSL
VPDNDPAKNIFYWKDLGAMANSTGISSDRVVPFFIDADAAPNPGGLPVGGVTQFDLPNNHLQYALTWYGLAAALVAVSGV
FVYRRRR
>Mature_246_residues
ADGHMPAFRRLFGRVAGVVLVLAALAVLVALGTWQMQRLQWKEALIGAIAERRSAPAVPLEQIEAMAAAGGDIDYRTVHA
SGIYDHGRERHFFATHEGRTGFYVFTPLMLADARALFVNRGFVPFEKKDSSKRSEGLVAGKVTVNGLARPKLSGKPSSLV
PDNDPAKNIFYWKDLGAMANSTGISSDRVVPFFIDADAAPNPGGLPVGGVTQFDLPNNHLQYALTWYGLAAALVAVSGVF
VYRRRR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=219, Percent_Identity=37.4429223744292, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17553856, Length=238, Percent_Identity=26.890756302521, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17864366, Length=227, Percent_Identity=29.0748898678414, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 26796; Mature: 26665

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGHMPAFRRLFGRVAGVVLVLAALAVLVALGTWQMQRLQWKEALIGAIAERRSAPAVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LEQIEAMAAAGGDIDYRTVHASGIYDHGRERHFFATHEGRTGFYVFTPLMLADARALFVN
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHC
RGFVPFEKKDSSKRSEGLVAGKVTVNGLARPKLSGKPSSLVPDNDPAKNIFYWKDLGAMA
CCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
NSTGISSDRVVPFFIDADAAPNPGGLPVGGVTQFDLPNNHLQYALTWYGLAAALVAVSGV
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
FVYRRRR
HEEEECC
>Mature Secondary Structure 
ADGHMPAFRRLFGRVAGVVLVLAALAVLVALGTWQMQRLQWKEALIGAIAERRSAPAVP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LEQIEAMAAAGGDIDYRTVHASGIYDHGRERHFFATHEGRTGFYVFTPLMLADARALFVN
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHC
RGFVPFEKKDSSKRSEGLVAGKVTVNGLARPKLSGKPSSLVPDNDPAKNIFYWKDLGAMA
CCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
NSTGISSDRVVPFFIDADAAPNPGGLPVGGVTQFDLPNNHLQYALTWYGLAAALVAVSGV
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
FVYRRRR
HEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA