| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150395749
Identifier: 150395749
GI number: 150395749
Start: 567734
End: 568117
Strand: Direct
Name: 150395749
Synonym: Smed_0525
Alternate gene names: NA
Gene position: 567734-568117 (Clockwise)
Preceding gene: 150395748
Following gene: 150395750
Centisome position: 15.01
GC content: 60.16
Gene sequence:
>384_bases ATGAATGAAGACAGGGCGCTCTACCCACCCGTTGATCCGGTCATGACGGGCGTCAAGGGACTCTGCCCGCGCTGCGGCCA GGGGAAGCTCTTCGACGGCTTGCTGAAGGTTCGTCCGGCCTGCAGCAATTGCGAACTCGATTATGGTTTCGCCGATTCCG GCGATGGTCCGGTCGTGTTCGTTATCCTGATCGTGGGCTTCATCGTCGTCGGCGCAGCGCTCTGGATGGAGGTCAATGTC AACCCGCCGCTCTGGCTGCACTTCCTCCTGTGGATCCCGCTTGCGACGGTTTTAAGCCTGGCCCTGACGCGTATGCTGAA GGGCGTTCTCATCAATCTGCAATACCGCAACAATGCGCGCCCCGGTGAAATCGACCGTGGCTGA
Upstream 100 bases:
>100_bases GGCTGCATTGCCGTTACCAATGCGGAAATGGACGAAATCTGGGACATGGTTCCCAACAATACCCCGATCGTGATCAATCC ATGAACGAAGACATCAATCC
Downstream 100 bases:
>100_bases CGGTCACATGCCGGCCTTTCGCAGGCTCTTTGGTCGCGTCGCGGGCGTTGTCCTGGTGCTCGCCGCTCTCGCCGTGCTCG TGGCGCTCGGTACGTGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNEDRALYPPVDPVMTGVKGLCPRCGQGKLFDGLLKVRPACSNCELDYGFADSGDGPVVFVILIVGFIVVGAALWMEVNV NPPLWLHFLLWIPLATVLSLALTRMLKGVLINLQYRNNARPGEIDRG
Sequences:
>Translated_127_residues MNEDRALYPPVDPVMTGVKGLCPRCGQGKLFDGLLKVRPACSNCELDYGFADSGDGPVVFVILIVGFIVVGAALWMEVNV NPPLWLHFLLWIPLATVLSLALTRMLKGVLINLQYRNNARPGEIDRG >Mature_127_residues MNEDRALYPPVDPVMTGVKGLCPRCGQGKLFDGLLKVRPACSNCELDYGFADSGDGPVVFVILIVGFIVVGAALWMEVNV NPPLWLHFLLWIPLATVLSLALTRMLKGVLINLQYRNNARPGEIDRG
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13923; Mature: 13923
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDRALYPPVDPVMTGVKGLCPRCGQGKLFDGLLKVRPACSNCELDYGFADSGDGPVVF CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VILIVGFIVVGAALWMEVNVNPPLWLHFLLWIPLATVLSLALTRMLKGVLINLQYRNNAR HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC PGEIDRG CCCCCCC >Mature Secondary Structure MNEDRALYPPVDPVMTGVKGLCPRCGQGKLFDGLLKVRPACSNCELDYGFADSGDGPVVF CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VILIVGFIVVGAALWMEVNVNPPLWLHFLLWIPLATVLSLALTRMLKGVLINLQYRNNAR HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC PGEIDRG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA