Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is phoH [H]
Identifier: 150395269
GI number: 150395269
Start: 42491
End: 43546
Strand: Direct
Name: phoH [H]
Synonym: Smed_0041
Alternate gene names: 150395269
Gene position: 42491-43546 (Clockwise)
Preceding gene: 150395268
Following gene: 150395270
Centisome position: 1.12
GC content: 61.55
Gene sequence:
>1056_bases TTGAACGGACACGAACTGATTTCTTCCTCACCGCGCCAGTCGAAGACATCCGCGACGGACGCCAATCACTTCGTGCTCAC CTTCGAGAACAACCGCTTTGCGAGCGAACTCTTCGGCCAGTTCGACCAGAATTTGAAGCTGCTTGAAGAGCGGTTGCGCA TCGATGCCCGACCGCGGGGAAACTCCGTCGCAATCTCCGGTGACGTGGTTGCCACCAATCAGGCGCGCCGCGCTCTCGAC TATCTCTACGGAAGGCTGCAGAGTGGCGCTTCGATCGATACATCAGATGTCGAAGGGGCGATCCGCATGGCGGTCGCCGC CGACGATCAGCTACAGTTGCCGACGATGGAGCGCAAAGCCAAATTGACAATGGCCCAGATTTCGACGCGCAAGAAGACCA TCGTTGCGCGCACTCCGATGCAGGATGCCTATATCCGCGCGATGGAGCGGTCGGAACTCGTCTTCGGCGTCGGCCCGGCC GGCACCGGCAAGACCTACCTTGCCGTCGCTCATGCCGCCCAGCTGCTGGAGCGTGGCGCAGTCGACCGTATCATTCTCTC AAGGCCGGCGGTCGAAGCGGGCGAGCGTCTCGGCTTCTTGCCGGGCGACATGAAGGAGAAGGTCGATCCCTATCTCAGAC CTCTCTATGACGCGCTCTATGACATGATGCCGGGCGACAAGGTGGAGCGGGCAATCACCGCAGGTGTAATCGAGATCGCG CCGCTTGCCTTCATGCGCGGGCGCACGCTCGCCAATGCCGCCGTTATCCTGGATGAGGCACAGAACACGACATCGATGCA GATGAAGATGTTCCTGACGCGTCTGGGCGAAAACGGCCGGATGATCATCACGGGTGATCCGAGTCAGGTCGACCTGCCGC GCGGCGTGAAGTCGGGCCTGGTGGAGGCGCTGCAGATACTCAAGGGAGTAGAGGGCGTCTCGGTGATCCGCTTCAAGGAC GCCGACGTCGTCCGCCATCCGCTGGTGGCGCGGATCGTCAGAGCCTATGACAGCCAGACGGCGGTTCACGACGAGAGCGA GCAGGGCGATCGTTGA
Upstream 100 bases:
>100_bases TCGCAAATCGGTGACATTATCAGAGTGCGAATCACCAAGGCCGGGCCGAACAGCCTGTTTGCCGAGATGATCGGGGAAAC GGAAGCAAGGAGCTGACCGC
Downstream 100 bases:
>100_bases TCTTGTTTATTGCGTGATTTACCCGGAGAGGAGCCTCGCTTTTCGGATCGCGGGCGGTCGACGATGACGGCATTGGACAT TCAGATCAGCGTCGAGGCGG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNGHELISSSPRQSKTSATDANHFVLTFENNRFASELFGQFDQNLKLLEERLRIDARPRGNSVAISGDVVATNQARRALD YLYGRLQSGASIDTSDVEGAIRMAVAADDQLQLPTMERKAKLTMAQISTRKKTIVARTPMQDAYIRAMERSELVFGVGPA GTGKTYLAVAHAAQLLERGAVDRIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPGDKVERAITAGVIEIA PLAFMRGRTLANAAVILDEAQNTTSMQMKMFLTRLGENGRMIITGDPSQVDLPRGVKSGLVEALQILKGVEGVSVIRFKD ADVVRHPLVARIVRAYDSQTAVHDESEQGDR
Sequences:
>Translated_351_residues MNGHELISSSPRQSKTSATDANHFVLTFENNRFASELFGQFDQNLKLLEERLRIDARPRGNSVAISGDVVATNQARRALD YLYGRLQSGASIDTSDVEGAIRMAVAADDQLQLPTMERKAKLTMAQISTRKKTIVARTPMQDAYIRAMERSELVFGVGPA GTGKTYLAVAHAAQLLERGAVDRIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPGDKVERAITAGVIEIA PLAFMRGRTLANAAVILDEAQNTTSMQMKMFLTRLGENGRMIITGDPSQVDLPRGVKSGLVEALQILKGVEGVSVIRFKD ADVVRHPLVARIVRAYDSQTAVHDESEQGDR >Mature_351_residues MNGHELISSSPRQSKTSATDANHFVLTFENNRFASELFGQFDQNLKLLEERLRIDARPRGNSVAISGDVVATNQARRALD YLYGRLQSGASIDTSDVEGAIRMAVAADDQLQLPTMERKAKLTMAQISTRKKTIVARTPMQDAYIRAMERSELVFGVGPA GTGKTYLAVAHAAQLLERGAVDRIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPGDKVERAITAGVIEIA PLAFMRGRTLANAAVILDEAQNTTSMQMKMFLTRLGENGRMIITGDPSQVDLPRGVKSGLVEALQILKGVEGVSVIRFKD ADVVRHPLVARIVRAYDSQTAVHDESEQGDR
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=330, Percent_Identity=48.7878787878788, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI1787257, Length=217, Percent_Identity=49.3087557603687, Blast_Score=211, Evalue=8e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38529; Mature: 38529
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHELISSSPRQSKTSATDANHFVLTFENNRFASELFGQFDQNLKLLEERLRIDARPRG CCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVAISGDVVATNQARRALDYLYGRLQSGASIDTSDVEGAIRMAVAADDQLQLPTMERKA CEEEEECCEEECHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCCCCHHHHH KLTMAQISTRKKTIVARTPMQDAYIRAMERSELVFGVGPAGTGKTYLAVAHAAQLLERGA HHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC VDRIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPGDKVERAITAGVIEIA HHHHHHCCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH PLAFMRGRTLANAAVILDEAQNTTSMQMKMFLTRLGENGRMIITGDPSQVDLPRGVKSGL HHHHHCCCHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VEALQILKGVEGVSVIRFKDADVVRHPLVARIVRAYDSQTAVHDESEQGDR HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNGHELISSSPRQSKTSATDANHFVLTFENNRFASELFGQFDQNLKLLEERLRIDARPRG CCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVAISGDVVATNQARRALDYLYGRLQSGASIDTSDVEGAIRMAVAADDQLQLPTMERKA CEEEEECCEEECHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCCCCHHHHH KLTMAQISTRKKTIVARTPMQDAYIRAMERSELVFGVGPAGTGKTYLAVAHAAQLLERGA HHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC VDRIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPGDKVERAITAGVIEIA HHHHHHCCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH PLAFMRGRTLANAAVILDEAQNTTSMQMKMFLTRLGENGRMIITGDPSQVDLPRGVKSGL HHHHHCCCHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VEALQILKGVEGVSVIRFKDADVVRHPLVARIVRAYDSQTAVHDESEQGDR HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]