Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is yeaZ [H]

Identifier: 150395265

GI number: 150395265

Start: 38810

End: 39466

Strand: Direct

Name: yeaZ [H]

Synonym: Smed_0037

Alternate gene names: 150395265

Gene position: 38810-39466 (Clockwise)

Preceding gene: 150395264

Following gene: 150395266

Centisome position: 1.03

GC content: 65.14

Gene sequence:

>657_bases
ATGTTTGTTCTTGCCATAGATACATCCGGGGCCGGCTGTTTCGCTGCGGTCTATGACGGTGGCGCAGGAAAGCTGCTTGC
GTGTGCGGGCGCGGATATCGGGCGTGGCCATGCCGAACGCCTTATGGAATTCGTTGATGAGGCCTTGAGCGCCTCGGGTC
GGGAACTTGCCGAGATCGACCGCATCGCCGTGACGACAGGTCCGGGATCGTTCACCGGAATCCGCGTCGGCGTTGCCGCT
GCGCGCGGCCTCGCTCTGGCCCTCGCAAAGCCCGCAGTCGGCATAACCACGCTTCGGGCCGTTGCCGAAAGCGAAAGCCT
GAAACAGAATGGCCAGCCGGTGCTCGCCGTGATCGACGCGAAGCGGGAAGAGGTTTACCTTCAGGCTTTCGATGCCTCGG
GACGGCCGCAAGGCGAGGCTGAAATCCTGTCCGTCGAGAAAGCGCGCCTGCGCTTTTCCGGATTTGCCGGTATCATCTGT
GGCTCCGGTGCTCATGCCGTCACCGGTGCCGCGGGCGGAAAGCCTGACGAGGTCGACATGGAGACGCTCGCCCGGCTGGG
CGCCATGGCCGATCCGGCCTCGGCGCCTGCGAAGCCGCTTTATCTGCGCGGGCCGGATGCCAAACCCCAGGCTGGCTTCG
CGGTGGTCCGCGCCTGA

Upstream 100 bases:

>100_bases
CACAAATGTGATTCCGAAGTGCCGCGTCGATTTGGTGACGCAATGCGGCTGCCCACGCAGTCGTACCGCTTGGGGTGCAG
GGGAGGAGGCCGCGGCTGAA

Downstream 100 bases:

>100_bases
CCGGAAGAAGCCGAGCATATTCGCCCGGTTATCTTCAGCCAATCATATCTCCTAAAACGTCCAAGAAGCGCCCTGATGAG
CCTTACCGACTACTTCACCC

Product: peptidase M22 glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA
ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC
GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA

Sequences:

>Translated_218_residues
MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA
ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC
GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA
>Mature_218_residues
MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEIDRIAVTTGPGSFTGIRVGVAA
ARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDAKREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIIC
GSGAHAVTGAAGGKPDEVDMETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=174, Percent_Identity=34.4827586206897, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 22093; Mature: 22093

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEID
CEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC
RIAVTTGPGSFTGIRVGVAAARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDA
EEEEEECCCCCCEEEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
KREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIICGSGAHAVTGAAGGKPDEVDM
CCCEEEEEEECCCCCCCCCHHEEEHHHHHEEECCCEEEEECCCCCEEECCCCCCCCCCCH
ETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MFVLAIDTSGAGCFAAVYDGGAGKLLACAGADIGRGHAERLMEFVDEALSASGRELAEID
CEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHC
RIAVTTGPGSFTGIRVGVAAARGLALALAKPAVGITTLRAVAESESLKQNGQPVLAVIDA
EEEEEECCCCCCEEEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
KREEVYLQAFDASGRPQGEAEILSVEKARLRFSGFAGIICGSGAHAVTGAAGGKPDEVDM
CCCEEEEEEECCCCCCCCCHHEEEHHHHHEEECCCEEEEECCCCCEEECCCCCCCCCCCH
ETLARLGAMADPASAPAKPLYLRGPDAKPQAGFAVVRA
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]