Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
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Accession | NC_001988 |
Length | 192,000 |
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Identifier: 15004857
GI number: 15004857
Start: 165962
End: 166639
Strand: Direct
Name: Not Available
Synonym: CA_P0154
Alternate gene names: NA
Gene position: 165962-166639 (Clockwise)
Preceding gene: 15004856
Following gene: 15004859
Centisome position: 86.44
GC content: 26.4
Gene sequence:
>678_bases ATGATGAATGAATTAGATGCGATGATTAAGAAAAATTATGAAATGAGCAAAAAATTAAATGAAGCTAATGACAAAGTTTA TACTAACATTTTATGCTATATTAGGGTAAGCTCTCTTGATGCAAAGGAAAAGGAAGAAATTATCTCTGATATTCTCGAAA TGTTTTTACGCTGTCAAGCAGAAGAAAAATCTATTGATGAACTAATTGGCAATGATTATAAAAGCTTTTGTGATTCAATT ATAGAATCTGCTGGTGAAAACAAGTTTTCTAAAGAAAATATTAAAGAAACTTTATATATAATTATAAATGGTATTTTTAT ATTATTAAGTATCAACTTTATATTTGATTATGTGCCAAGAGCAATTAAATATAGAAGCATAGTAAACTATAAGCTTGGAG TATCTTTTCTCTTAACAACCACAATGATTTTATTAATTGCCTTTGGTATAGTAAAATATATAGGAAAAACCAGCTTCAAT GATAACAACATAAGCGATTCTAAAAAAGCAAAGATTCTTTTTATAATTTTCTATGTAGTAATTACTGTCATCTTGGGACT TATAGGCTATATACTTAGAACCTATACTTTGTTTTCAGCTAACCCTTATGTAATGTTAGCTATACTTGCTGTTTACTGGA TATATAAATTATTAGAAAGATTTAGAAAAGAGGCTTAA
Upstream 100 bases:
>100_bases TCCTCTAAAGGAAAAGAAGAGCTGAAAGACTTCTATGAAAACTGGCTTAATCTTAAGGCAAGCATAGATAAAATATTTTT AGATTATGGAGATGATAATA
Downstream 100 bases:
>100_bases TTAGCTCTTTTCTATTTATCTAAGATTGGGCGCAATAAAATACGTAGCAAACCCCACTATAATAAAAAGAACACATGAAA AAAAGTACAAAAGCATGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MMNELDAMIKKNYEMSKKLNEANDKVYTNILCYIRVSSLDAKEKEEIISDILEMFLRCQAEEKSIDELIGNDYKSFCDSI IESAGENKFSKENIKETLYIIINGIFILLSINFIFDYVPRAIKYRSIVNYKLGVSFLLTTTMILLIAFGIVKYIGKTSFN DNNISDSKKAKILFIIFYVVITVILGLIGYILRTYTLFSANPYVMLAILAVYWIYKLLERFRKEA
Sequences:
>Translated_225_residues MMNELDAMIKKNYEMSKKLNEANDKVYTNILCYIRVSSLDAKEKEEIISDILEMFLRCQAEEKSIDELIGNDYKSFCDSI IESAGENKFSKENIKETLYIIINGIFILLSINFIFDYVPRAIKYRSIVNYKLGVSFLLTTTMILLIAFGIVKYIGKTSFN DNNISDSKKAKILFIIFYVVITVILGLIGYILRTYTLFSANPYVMLAILAVYWIYKLLERFRKEA >Mature_225_residues MMNELDAMIKKNYEMSKKLNEANDKVYTNILCYIRVSSLDAKEKEEIISDILEMFLRCQAEEKSIDELIGNDYKSFCDSI IESAGENKFSKENIKETLYIIINGIFILLSINFIFDYVPRAIKYRSIVNYKLGVSFLLTTTMILLIAFGIVKYIGKTSFN DNNISDSKKAKILFIIFYVVITVILGLIGYILRTYTLFSANPYVMLAILAVYWIYKLLERFRKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26095; Mature: 26095
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNELDAMIKKNYEMSKKLNEANDKVYTNILCYIRVSSLDAKEKEEIISDILEMFLRCQA CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCC EEKSIDELIGNDYKSFCDSIIESAGENKFSKENIKETLYIIINGIFILLSINFIFDYVPR HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKYRSIVNYKLGVSFLLTTTMILLIAFGIVKYIGKTSFNDNNISDSKKAKILFIIFYVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH ITVILGLIGYILRTYTLFSANPYVMLAILAVYWIYKLLERFRKEA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMNELDAMIKKNYEMSKKLNEANDKVYTNILCYIRVSSLDAKEKEEIISDILEMFLRCQA CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCC EEKSIDELIGNDYKSFCDSIIESAGENKFSKENIKETLYIIINGIFILLSINFIFDYVPR HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKYRSIVNYKLGVSFLLTTTMILLIAFGIVKYIGKTSFNDNNISDSKKAKILFIIFYVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH ITVILGLIGYILRTYTLFSANPYVMLAILAVYWIYKLLERFRKEA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA