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Identifier: 15004856

GI number: 15004856

Start: 165625

End: 165972

Strand: Direct

Name: Not Available

Synonym: CA_P0153

Alternate gene names: 15004856

Gene position: 165625-165972 (Clockwise)

Preceding gene: 15004855

Following gene: 15004857

Centisome position: 86.26

GC content: 29.89

Gene sequence:

>348_bases
TTGAATGATAAATCTCAATTTCTAAAAGGTACTCTAGAGGGATGTATTCTAAAAATAATTAATGATGCTGGTGAAGTTTA
TGGATATGAAATAGCTGAAAAATTAAAGGATTATGGCTTGAATAATGTAAGTGAAGGAACAATTTATCCACTTCTTTTAA
GGCTGGAAAAATCAGAACTTCTGAATTCAATAAAAAAAGAATCCCCCTATGGTCCTAAGAGAAAGTATTATACCCTATCC
TCTAAAGGAAAAGAAGAGCTGAAAGACTTCTATGAAAACTGGCTTAATCTTAAGGCAAGCATAGATAAAATATTTTTAGA
TTATGGAGATGATAATAATGATGAATGA

Upstream 100 bases:

>100_bases
TATCCTAATTGTTTACTCTTTTTTTCTATTTACAATTTATCTATTATGTTATACAATATAGTTAAACTAACTTGCATAAC
ATAATAGCGAGGTGATTTTA

Downstream 100 bases:

>100_bases
ATTAGATGCGATGATTAAGAAAAATTATGAAATGAGCAAAAAATTAAATGAAGCTAATGACAAAGTTTATACTAACATTT
TATGCTATATTAGGGTAAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNDKSQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSELLNSIKKESPYGPKRKYYTLS
SKGKEELKDFYENWLNLKASIDKIFLDYGDDNNDE

Sequences:

>Translated_115_residues
MNDKSQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSELLNSIKKESPYGPKRKYYTLS
SKGKEELKDFYENWLNLKASIDKIFLDYGDDNNDE
>Mature_115_residues
MNDKSQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSELLNSIKKESPYGPKRKYYTLS
SKGKEELKDFYENWLNLKASIDKIFLDYGDDNNDE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 13256; Mature: 13256

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKSQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LNSIKKESPYGPKRKYYTLSSKGKEELKDFYENWLNLKASIDKIFLDYGDDNNDE
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MNDKSQFLKGTLEGCILKIINDAGEVYGYEIAEKLKDYGLNNVSEGTIYPLLLRLEKSEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LNSIKKESPYGPKRKYYTLSSKGKEELKDFYENWLNLKASIDKIFLDYGDDNNDE
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]