Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
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Accession | NC_001988 |
Length | 192,000 |
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Identifier: 15004826
GI number: 15004826
Start: 133702
End: 134199
Strand: Direct
Name: Not Available
Synonym: CA_P0123
Alternate gene names: NA
Gene position: 133702-134199 (Clockwise)
Preceding gene: 15004824
Following gene: 15004831
Centisome position: 69.64
GC content: 21.89
Gene sequence:
>498_bases ATGAAAATACATTTAAAACGATTAATACCTATAATTTGTTTTTTTATAATATGCTTGGTAATATTTTTAAAATTTATTTA TAGTAATTCACCCGAAAAAGCAGTATCCCTTTATAATAAAAAATACAATTATAACAACAATAAAATCCTAAAAAAATCAA CTATAAATGAACATTCAAAATTATTTATTTCAATTGATAATACAACTATATACATAGATATTATAAATAGTAATTTTTTA AATCATTGGAAGGTAACTACTAGATTCAGCATTAATGATATATATAATCATCAAATTAACAGATGTGAATGGGATACATT AAGATACAGTCCTCAAGTAGGATATAAAGGAATTTACTTTGGTATAATTAATGATAATCATGTAAAGAGGGTGACTATAA ACAATAAGAACTGTACAGTAGAAAAATTAAAGCCTAATTTATATTTATGGTATCGCTTTGATAATCCTACTGGTTTCAAA CTTAAAATTACAAATTAA
Upstream 100 bases:
>100_bases CTTTTCAATGTAAAATTAATACCCTCATTACATAATTGACCTATTATTACATTTAATGTACTATTTATATAACAAATAAC TTACTTTGGAGGATTATATA
Downstream 100 bases:
>100_bases TACTATGTATACAAAAAGTACACAGCCATTTAAGTAGCTATGTACTTTTGAAATTTTCAAATTAATTTGATTTAACAGTT GTTCCGCTTTTAGTAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKIHLKRLIPIICFFIICLVIFLKFIYSNSPEKAVSLYNKKYNYNNNKILKKSTINEHSKLFISIDNTTIYIDIINSNFL NHWKVTTRFSINDIYNHQINRCEWDTLRYSPQVGYKGIYFGIINDNHVKRVTINNKNCTVEKLKPNLYLWYRFDNPTGFK LKITN
Sequences:
>Translated_165_residues MKIHLKRLIPIICFFIICLVIFLKFIYSNSPEKAVSLYNKKYNYNNNKILKKSTINEHSKLFISIDNTTIYIDIINSNFL NHWKVTTRFSINDIYNHQINRCEWDTLRYSPQVGYKGIYFGIINDNHVKRVTINNKNCTVEKLKPNLYLWYRFDNPTGFK LKITN >Mature_165_residues MKIHLKRLIPIICFFIICLVIFLKFIYSNSPEKAVSLYNKKYNYNNNKILKKSTINEHSKLFISIDNTTIYIDIINSNFL NHWKVTTRFSINDIYNHQINRCEWDTLRYSPQVGYKGIYFGIINDNHVKRVTINNKNCTVEKLKPNLYLWYRFDNPTGFK LKITN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19751; Mature: 19751
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHLKRLIPIICFFIICLVIFLKFIYSNSPEKAVSLYNKKYNYNNNKILKKSTINEHSK CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCCEEEEECCCCCCCE LFISIDNTTIYIDIINSNFLNHWKVTTRFSINDIYNHQINRCEWDTLRYSPQVGYKGIYF EEEEECCCEEEEEEECCCCCCCEEEEEEEEECHHCCCCCCCEECCEEEECCCCCCCEEEE GIINDNHVKRVTINNKNCTVEKLKPNLYLWYRFDNPTGFKLKITN EEECCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCCEEEEECC >Mature Secondary Structure MKIHLKRLIPIICFFIICLVIFLKFIYSNSPEKAVSLYNKKYNYNNNKILKKSTINEHSK CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCCEEEEECCCCCCCE LFISIDNTTIYIDIINSNFLNHWKVTTRFSINDIYNHQINRCEWDTLRYSPQVGYKGIYF EEEEECCCEEEEEEECCCCCCCEEEEEEEEECHHCCCCCCCEECCEEEECCCCCCCEEEE GIINDNHVKRVTINNKNCTVEKLKPNLYLWYRFDNPTGFKLKITN EEECCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA