Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15004810

GI number: 15004810

Start: 113673

End: 114131

Strand: Direct

Name: Not Available

Synonym: CA_P0107

Alternate gene names: 15004810

Gene position: 113673-114131 (Clockwise)

Preceding gene: 15004808

Following gene: 15004811

Centisome position: 59.2

GC content: 32.46

Gene sequence:

>459_bases
ATGTACTATACAATTAGCGAAGTATCCAAAAAGATTAACGTATCTCCTCACACCCTTCGTTTTTATGCTAAAGAAGGTTT
AATGCCATTTGTTGAACGCAGTAAAAGCGGTATTCGCATGTTTAAAGATGAGGATTTTGAATCTCTTTTTATGATTGAAT
GTTTAAAGAAATCTGGAATGTCAATCAAAGATATAAAGGAATTTATGAACTGGTGTATGCAGGGCGATGAAACAATTGAT
CAGAGGTTAAATATGTTTAGACAGCAGCAAGAAAGAGTTATAAAACAGATTGCTGAACTTAAGGAAACCCTTGATTTAAT
CAAATATAAATGTTGGTATTATGAAACTGCACAGGCTGCTGGGACATGCGATATACATACTTCCTTAAAGCTAGAAGATA
TTCCAGAAACCATTCGAAATTTAAAAGAAAATATGGGAAAGATGTATTGTCATAAATAA

Upstream 100 bases:

>100_bases
ATCAAGTTGACTCACACTCTCTTGCGTGATATTATCATCATAAACTTGAGAGTGTACTCTAAGTCAAGAGAATTTTAAAA
TTTTTTTAGGGGGAATAAAA

Downstream 100 bases:

>100_bases
TAAAGCTATAAGAACTTATATCTTCAAAAGAAATAGCTTGTTGACAAATATATTATATACTACTATACTTTATAGTAGTA
TATAAATGGTGGTGATTAAA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MYYTISEVSKKINVSPHTLRFYAKEGLMPFVERSKSGIRMFKDEDFESLFMIECLKKSGMSIKDIKEFMNWCMQGDETID
QRLNMFRQQQERVIKQIAELKETLDLIKYKCWYYETAQAAGTCDIHTSLKLEDIPETIRNLKENMGKMYCHK

Sequences:

>Translated_152_residues
MYYTISEVSKKINVSPHTLRFYAKEGLMPFVERSKSGIRMFKDEDFESLFMIECLKKSGMSIKDIKEFMNWCMQGDETID
QRLNMFRQQQERVIKQIAELKETLDLIKYKCWYYETAQAAGTCDIHTSLKLEDIPETIRNLKENMGKMYCHK
>Mature_152_residues
MYYTISEVSKKINVSPHTLRFYAKEGLMPFVERSKSGIRMFKDEDFESLFMIECLKKSGMSIKDIKEFMNWCMQGDETID
QRLNMFRQQQERVIKQIAELKETLDLIKYKCWYYETAQAAGTCDIHTSLKLEDIPETIRNLKENMGKMYCHK

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 18093; Mature: 18093

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYTISEVSKKINVSPHTLRFYAKEGLMPFVERSKSGIRMFKDEDFESLFMIECLKKSGM
CEEEHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCCC
SIKDIKEFMNWCMQGDETIDQRLNMFRQQQERVIKQIAELKETLDLIKYKCWYYETAQAA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTCDIHTSLKLEDIPETIRNLKENMGKMYCHK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYYTISEVSKKINVSPHTLRFYAKEGLMPFVERSKSGIRMFKDEDFESLFMIECLKKSGM
CEEEHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCCC
SIKDIKEFMNWCMQGDETIDQRLNMFRQQQERVIKQIAELKETLDLIKYKCWYYETAQAA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTCDIHTSLKLEDIPETIRNLKENMGKMYCHK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]